Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3293 ATGGCCTCTTGCTGTTCCAAACTGCAATATCTTGCAAACCCGGTAACTAGACAAGTCCAGAATGTTGAGCAGCATAACCAAGATGTGAACTCTCTTAGTTTGATTTTAGCTAGGAAAACAAATGAAGCTGTTGAGATTCTCAAACTTATGTCATCGACCTATTTGATTGCACTTTTCCAAGCCATTGATTTTAGGCATTTGGAGGAGAATTTGAAGAACACCGTGAAGAACTCCGTGAGCCAAGTTGCCAAGAGGACACTAACCACCGGCATCAACGGCGAACTCCACTTCTTCTTAAGCTTGATGGTACTCAGTCGGGTGCCATGGAACGAAATATTTCCTCCTCTTCGTTCACCCACTTTACCGTTTCTGTGCATTCAAAGGATTAGGGCTCATGAATTTGAAAGATTTGGGGTTGTGGTGAAACGGCTTCGTTTTGATATTCCACAACAAATTCAGAATCACCAAGCAAAAAATTCAGATATTCCACAACAAATTTCACAAAAAATTCAAAAATTCCACAAAAAATCCAGTTCACAGAAGAAGAAGAAGAAGAAGGGAACGGCGGAGCTTGAGGCAGCAGATCTGATGCCACCGAGCAACGACGACTCGCGGAAAGCAGCGGCACCGGAGCTCGAGTACAAGACAGCAGCGGCAGAACTCAGACCTCGGGGAGAGAAAGAACTTCAGCAACACAGGGAAGAGAACGGCGGTGCCAATAGACAAGCCGGAGAAGGGAACGGCGGAATTTGA 753 0.4515 MASCCSKLQYLANPVTRQVQNVEQHNQDVNSLSLILARKTNEAVEILKLMSSTYLIALFQAIDFRHLEENLKNTVKNSVSQVAKRTLTTGINGELHFFLSLMVLSRVPWNEIFPPLRSPTLPFLCIQRIRAHEFERFGVVVKRLRFDIPQQIQNHQAKNSDIPQQISQKIQKFHKKSSSQKKKKKKGTAELEAADLMPPSNDDSRKAAAPELEYKTAAAELRPRGEKELQQHREENGGANRQAGEGNGGI* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3293 250 Gene3D Fumarase/aspartase (Central domain) 1 67 - -
Ahy16g3293 250 SUPERFAMILY L-aspartase-like 1 102 IPR008948 GO:0003824
Ahy16g3293 250 MobiDBLite consensus disorder prediction 217 239 - -
Ahy16g3293 250 PANTHER HISTIDINE AMMONIA-LYASE 1 96 IPR001106 -
Ahy16g3293 250 PANTHER PHENYLALANINE AMMONIA-LYASE 1 96 - -
Ahy16g3293 250 Pfam Aromatic amino acid lyase 1 75 IPR001106 -
Ahy16g3293 250 MobiDBLite consensus disorder prediction 168 250 - -
Ahy16g3293 250 Gene3D - 68 186 IPR023144 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3293 Ahy-Chr16 149821935 149833094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3293 1 202 Monolignol Biosynthesis Gene Families AT3G53260 41.333 8.07e-45 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3293 K10775 - ahf:112757855 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3293 16 149821935 149833094 Ahy16g3293 16 149821935 149833094 ECH