Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3278 ATGTCAGATAATAAGAATCATCAAATTCCTGAAGCAGAGTCACCACCTGAGAGTGATGACTTGAGCAACAATTGGTCTCTTGAATTATCAGATTACTTGGCCATTGATGATGATACTCAATGGCTTGATGATGAGTCATTTGTTTCTCAGCATAATCTTTATCATCAAAACTATGTTTTCCATCATCAACAACCCATTCAAGTTGGAGAAGCTACCTCCAACTTTGAAGGCTCTTCATCAACAAACATAAGCAGTGGACAAGAGAAGAAGGAAGCTAGACATAGATATGCATTCAAAACAAAATCAGAGGTTGAAGTGTTGGATGATGGATACAAGTGGAGGAAATATGGAAAGAAGATGGTCAAAAATAGCCCCAATCCAAGGAATTATTATAGGTGTTCAGTGGATGGATGTTCAGTGAAAAAGAGAGTAGAGAGGGATAGGGATGATCCAACGTATGTCATAACAACCTATGAAGGGATCCACATTCACCATCCTTCTTCATCTCGCTACTAG 516 0.3876 MSDNKNHQIPEAESPPESDDLSNNWSLELSDYLAIDDDTQWLDDESFVSQHNLYHQNYVFHHQQPIQVGEATSNFEGSSSTNISSGQEKKEARHRYAFKTKSEVEVLDDGYKWRKYGKKMVKNSPNPRNYYRCSVDGCSVKKRVERDRDDPTYVITTYEGIHIHHPSSSRY* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3278 171 Pfam WRKY DNA -binding domain 108 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy16g3278 171 ProSiteProfiles WRKY domain profile. 102 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy16g3278 171 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 13 165 - -
Ahy16g3278 171 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 13 165 IPR044810 GO:0003700
Ahy16g3278 171 SUPERFAMILY WRKY DNA-binding domain 100 166 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy16g3278 171 MobiDBLite consensus disorder prediction 1 23 - -
Ahy16g3278 171 SMART WRKY_cls 107 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy16g3278 171 Gene3D WRKY domain 94 160 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3278 Ahy-Chr16 149481976 149484280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3278 95 164 WRKY Transcription Factor Family AT5G26170 85.714 7.19e-42 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy16g3278 WRKY 2.10E-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3278 - - gmx:100819462 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3278 16 149481976 149484280 Ahy16g3278 16 149481976 149484280 ECH
Ahy16g3278 16 149481976 149484280 Ahy6g2581 6 110887069 110888985 hybridization