Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3276 ATGGACGATGGGCTTCTTGATGAAAAAGAACAAGAAGCCGAAGAAGAAGAAGAGAGTGTGGGCTCCAGCTTGACCATGGTCAAGGTCGCTGCTGCCAAAAAGTTCATCGAGAACCACTACAGAACCCACATGAAGAACATTCAAGACCGCAAGGAAAGACGTTGGGTTTTAGAAAGAAAATTAGCTTCTTCAGATGTGCCAAATGAGGAACGGATCAACCTCATCAAAGATTTAGAGAGAAAGGAGACAGAATATATGCGATTGAAAAGGCACAAGATATGTGTTGATGATTTTGAGCTCTTAACAATCATTGGAAGGGGGGCCTATGGAGAGGTTAGACTGTGTCGGGAAAAAAAGTCTGGAAACATTTATGCCATGAAAAAGCTGAAGAAATCTGAAATGCTCAAGAAAGGCCAGGTGGAACATGTTAGAGCTGAGAGGAACTTGCTGGCTGAAGTAGCCAGTCATTGCATCGTGAAACTTTACTACTCATTTCAAGATGCCGAGTACTTGTATTTAATTATGGAGTATCTGCCTGGGGGTGATATGATGACTCTTCTAATTAGGGAAGAAACCTTAAGTGAAGATATTGCTAAATTTTACATTGCACAAAGTGTTCTAGCCATAGAGTCTATTCATAGGCATGGTTACATTCACAGAGATATAAAACCTGATAACCTACTCTTGGACAAAAATGGTCACATGAAGCTCTCAGATTTTGGCCTCTGTAAGCCTCTTGACTGTACCACCTTGTATACACTGCATGAAAATCAGGTCATGGATGACAGAAATTTAGCAGAGCCAATGGATATTGATGGATCTATTCCTGGCATGGATAAGCATACCAGTTGGAGAAATCCACGTGAGCAGCTTGAGCATTGGCAGATGAACAGGAGAAAGTTGGCCTTTTCTACAGTGGGAACACCAGACTACATTGCTCCCGAAGTACTTCTGAAGAAAGGATATGGAATGGAATGTGACTGGTGGTCACTGGGAGCAATAATGTATGAAATGCTAGTTGGTTACCCTCCATTTTACTCGGAAAACCCTATGACTACCTGCAGAAAGATTGTTCATTGGAGAAATTTCTTAAGGTTTTCAGAAGATGCACAGTTGTCTCCAGAAGCTAAGGATCTAATCTGCAGATTGATGTGTGATGTTGACCATAGGTTAGGTACTCGAGGGGCGCATGAAATCAAGGCTCATCCTTGGTTCAATGGTGTAGAGTGGGATAAACTGTATGAAATGGAGGCAGCATTCAAACCACAAGTTGTTGGCGAGCTAGATACTCAGAACTTCATGAAATTTGATGAAGTTGATCCACCAACAAACGAAAGGCTTGGATCGGGAACCTCCCGGAAGATGCCCAAAGATCTAAACTTTGTTGGTTACACTTACAAGAACTTCGACGCTGTAAAAGGGCTGTGTCAAGGAGAGTCCATGCAAGAAATTTCTTCTAAATGGCCAGTTGAGGAAACGGGATTGCAAATGCTTGCATCATCCGGTGATCCCATGTTACCATAG 1524 0.4232 MDDGLLDEKEQEAEEEEESVGSSLTMVKVAAAKKFIENHYRTHMKNIQDRKERRWVLERKLASSDVPNEERINLIKDLERKETEYMRLKRHKICVDDFELLTIIGRGAYGEVRLCREKKSGNIYAMKKLKKSEMLKKGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLIREETLSEDIAKFYIAQSVLAIESIHRHGYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCTTLYTLHENQVMDDRNLAEPMDIDGSIPGMDKHTSWRNPREQLEHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSENPMTTCRKIVHWRNFLRFSEDAQLSPEAKDLICRLMCDVDHRLGTRGAHEIKAHPWFNGVEWDKLYEMEAAFKPQVVGELDTQNFMKFDEVDPPTNERLGSGTSRKMPKDLNFVGYTYKNFDAVKGLCQGESMQEISSKWPVEETGLQMLASSGDPMLP* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3276 507 Pfam Protein kinase C terminal domain 426 466 IPR017892 GO:0004674|GO:0005524|GO:0006468
Ahy16g3276 507 ProSitePatterns Protein kinases ATP-binding region signature. 104 127 IPR017441 GO:0005524
Ahy16g3276 507 Pfam Protein kinase domain 99 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3276 507 Pfam Protein kinase domain 297 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3276 507 Gene3D Phosphorylase Kinase; domain 1 424 434 - -
Ahy16g3276 507 SMART serkin_6 98 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3276 507 SUPERFAMILY Protein kinase-like (PK-like) 81 449 IPR011009 -
Ahy16g3276 507 ProSiteProfiles Protein kinase domain profile. 98 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3276 507 Gene3D Phosphorylase Kinase; domain 1 76 181 - -
Ahy16g3276 507 Gene3D Transferase(Phosphotransferase) domain 1 304 423 - -
Ahy16g3276 507 SMART pkinase_C_6 406 468 IPR000961 GO:0004674|GO:0005524|GO:0006468
Ahy16g3276 507 PANTHER SERINE/THREONINE-PROTEIN KINASE 19 486 - -
Ahy16g3276 507 MobiDBLite consensus disorder prediction 1 21 - -
Ahy16g3276 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Ahy16g3276 507 Gene3D Transferase(Phosphotransferase) domain 1 182 249 - -
Ahy16g3276 507 ProSiteProfiles AGC-kinase C-terminal domain profile. 406 476 IPR000961 GO:0004674|GO:0005524|GO:0006468
Ahy16g3276 507 MobiDBLite consensus disorder prediction 1 19 - -
Ahy16g3276 507 CDD STKc_NDR_like 96 467 - -
Ahy16g3276 507 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 19 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3276 Ahy-Chr16 149466698 149474441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3276 7 506 AGC Kinase Gene Family AT4G33080 74.460 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Ahy16g3276 Pkinase 2.60E-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3276 K08790 - gmx:100815717 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3276 16 149466698 149474441 Ahy16g3276 16 149466698 149474441 ECH
Ahy16g3276 16 149466698 149474441 Ahy17g3141 17 133136909 133143831 ECH