Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3274 ATGTCGACGGTATACGTTTTGGAACCGCCGACGAAGGGGAAGGTGGTTGTCAACACAACGCGGGGCCCACTCGACATCGAGCTATGGCCGAAGGAAGCACCCAAAGCTGTCAGGAACTTCGTTCAGCTCTGCATGGAAGGTTACTACGACAACACCATCTTCCACCGCGTCATCAAGGACTTTCTTGTTCAGGGTGGTGATCCCACCGGCACCGGCACTGGAGGTGAGAGTATTTATGGGGATGTTTTTGCCGATGAGTTTCATTCGCGTCTGAAATTCAAGCACAGAGGATTGGTTGCAATGGCCAATGCTGGGCCACCTAATTCAAATGGGAGTCAGTTTTTCATTACCCTTGACCGTTGTGACTGGCTTGATCGGAAGCATACTATTTTTGGAAAGGTAACAGGAGATACAATGTATAATCTTTTAAGGCTGGGTGAAGTTGAAACTGACAAAAACGACCGGCCTTTAGATCCACCTCCAAAGATATTATCAGTTGAGGTATTATGGAACCCATTTGAAGATATTGTGCCAAGAAATCTTCAGACTAAAGCTACACCTGTTACAGAAAATAAAGGTTTGAAGACAAAGGGTGTGAAAAAATTGAACTTGCTTTCGTTTGGGGAAGAAGCTGAAGAAGAAGAAAAGGAATTGGCATTGGTGAAGCAAAAGATTAAGAGCAGTCATGATGTCTTGAATGATCCTCGTCTTTTGAAGGAAGAAACTCCCAACAATGAAATGAGTAAAGCAACAAGGGATTTGCAGTTAACTGTAAGAGATGCACTAAAAACCAAGAAGGAAGAGCCTCAGAAAGAGTTAGAAACTAGTAAAATTGATTCCAGTGATGATGACGATGACGACGAAGACGATGGCAATGAAGCAGATTTTGATGCAAGAATGCGCAGGCGAATACTGAAAAAGCGGAAGGAGTTGGGTGACCTTCCTCCCAAGCCAAAGGTGCAAAATGGAAGATCCAGTCCAGAGCGCCGGGATATTTCAGCAGCCAGGTCAAATGCTTCACGGGTGGTTGATGATGATGATGATGATGATGATGATAAACCGAGGGCGGAAAAGTTGTCCTTGAAGAAGAAGGGAATAGGGTCTGAAGCAAGAGCTGAACGTATTGCTAATGCTGATGCAGATTTGCAGCTACTGAATGAAGCTGAGAGAGGAAGACAGTTGCAGAAACAGAAGAGACGCAGATTACAAGGGCGTGAAGATGATGTTCTTGCCAAACTCGAGAAATTCAAAAATTCCTTATCAGCAAAGTCGGCACCCAAAGCCAGTGAATCTAGTGATGTTGTTGATGACAAAGAACTGTCTGACTGGAAAAGTGTTGGCTTAAAATTTGCCCCGGAGTCTGGCAAGGATCGCATGTCTCGCAACGAAGACCCGAACGACTATGTCGTGCATGACCCTCTTTTGGAGAAAGGGAAAGAGAAGTTCAATAGGATGCAAGCCAAACAAAAGAGACGAGAACGCGAGTGGGCTGGGAGATCCCTCACGTGA 1509 0.452 MSTVYVLEPPTKGKVVVNTTRGPLDIELWPKEAPKAVRNFVQLCMEGYYDNTIFHRVIKDFLVQGGDPTGTGTGGESIYGDVFADEFHSRLKFKHRGLVAMANAGPPNSNGSQFFITLDRCDWLDRKHTIFGKVTGDTMYNLLRLGEVETDKNDRPLDPPPKILSVEVLWNPFEDIVPRNLQTKATPVTENKGLKTKGVKKLNLLSFGEEAEEEEKELALVKQKIKSSHDVLNDPRLLKEETPNNEMSKATRDLQLTVRDALKTKKEEPQKELETSKIDSSDDDDDDEDDGNEADFDARMRRRILKKRKELGDLPPKPKVQNGRSSPERRDISAARSNASRVVDDDDDDDDDKPRAEKLSLKKKGIGSEARAERIANADADLQLLNEAERGRQLQKQKRRRLQGREDDVLAKLEKFKNSLSAKSAPKASESSDVVDDKELSDWKSVGLKFAPESGKDRMSRNEDPNDYVVHDPLLEKGKEKFNRMQAKQKRREREWAGRSLT* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3274 502 MobiDBLite consensus disorder prediction 454 502 - -
Ahy16g3274 502 Gene3D - 2 183 IPR029000 -
Ahy16g3274 502 PANTHER SPLICEOSOME-ASSOCIATED PROTEIN CWC27 HOMOLOG 5 198 - -
Ahy16g3274 502 MobiDBLite consensus disorder prediction 451 502 - -
Ahy16g3274 502 MobiDBLite consensus disorder prediction 279 293 - -
Ahy16g3274 502 CDD cyclophilin_CeCYP16-like 8 179 - -
Ahy16g3274 502 MobiDBLite consensus disorder prediction 294 315 - -
Ahy16g3274 502 MobiDBLite consensus disorder prediction 256 278 - -
Ahy16g3274 502 MobiDBLite consensus disorder prediction 234 370 - -
Ahy16g3274 502 MobiDBLite consensus disorder prediction 353 370 - -
Ahy16g3274 502 Coils Coil 204 224 - -
Ahy16g3274 502 Coils Coil 385 405 - -
Ahy16g3274 502 SUPERFAMILY Cyclophilin-like 14 182 IPR029000 -
Ahy16g3274 502 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 5 198 IPR044666 -
Ahy16g3274 502 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 168 IPR002130 GO:0000413|GO:0003755
Ahy16g3274 502 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 159 IPR002130 GO:0000413|GO:0003755
Ahy16g3274 502 MobiDBLite consensus disorder prediction 323 343 - -
Ahy16g3274 502 MobiDBLite consensus disorder prediction 400 414 - -
Ahy16g3274 502 MobiDBLite consensus disorder prediction 388 439 - -
Ahy16g3274 502 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Ahy16g3274 502 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Ahy16g3274 502 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Ahy16g3274 502 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Ahy16g3274 502 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Ahy16g3274 502 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 49 66 IPR020892 GO:0003755|GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3274 Ahy-Chr16 149420878 149427248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3274 9 173 U-box Gene Family AT5G67530 48.485 3.27e-43 160
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3274 16 149420878 149427248 Ahy16g3274 16 149420878 149427248 ECH