Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3264 ATGTCTACTACCATGACTACTACACCTAACATTGATTCAACCTTGCAAAACTCTACTTTGAACAGAGTAGTAGATTCTAGTTGCAAGATGTACAAAGGTGTGAGGAAGAGGAAATGGGGCAAATGGGTATCGGAGATTAGGCTTCCCAACAGCCGAGAACGGATATGGTTGGGTTCTTATGACACCCAACAAAAGGCGGCTAGAGCCTTCGACGCCGCCCTCTACTGCCTTCGCGGCCGCCACGCCAGTTTCAATTTCCCCGACACGCCTCTTCATTTGGAGATCAACAATGTAAGTCACTACCATTCTCTCTCCCACCATGAAATTCAACAAGTTGCATCCAAATTCGCCAATAATTTTGATGCTGAGGAAGAAGAGGAACCGTCATCACAAAATGGTGCTAATAGTGCAAGCTCCGTGTGTGATTATGATGGGAGTAATAATAATAATAATAACGACGACAATACTAATAATAACGTGCAAGTGGACCATGGGGACATGGATTGGACATTTTTGAACGTGTTGGATGATCAAAATGATTCCAATTTTGATAACACTATTGGCTATGATTTTGGCCTCTACTATGGAGGGATAGATAAGGTGCACTCAGGTGAGTTTTTGTATACTACTACACCACCAACAACTTTTGAGGATAACAATAATGGTGATGCTGATGATGATGATGCTTTTTCTAACCATTCATTCCTTTGGAGTTGGAATTTTTGA 726 0.4187 MSTTMTTTPNIDSTLQNSTLNRVVDSSCKMYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTQQKAARAFDAALYCLRGRHASFNFPDTPLHLEINNVSHYHSLSHHEIQQVASKFANNFDAEEEEEPSSQNGANSASSVCDYDGSNNNNNNDDNTNNNVQVDHGDMDWTFLNVLDDQNDSNFDNTIGYDFGLYYGGIDKVHSGEFLYTTTPPTTFEDNNNGDADDDDAFSNHSFLWSWNF* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3264 241 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF018 17 241 - -
Ahy16g3264 241 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Ahy16g3264 241 MobiDBLite consensus disorder prediction 121 162 - -
Ahy16g3264 241 Gene3D AP2/ERF domain 29 88 IPR036955 GO:0003700|GO:0006355
Ahy16g3264 241 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Ahy16g3264 241 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Ahy16g3264 241 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Ahy16g3264 241 MobiDBLite consensus disorder prediction 129 162 - -
Ahy16g3264 241 Pfam AP2 domain 31 79 IPR001471 GO:0003700|GO:0006355
Ahy16g3264 241 CDD AP2 31 89 IPR001471 GO:0003700|GO:0006355
Ahy16g3264 241 SUPERFAMILY DNA-binding domain 30 88 IPR016177 GO:0003677
Ahy16g3264 241 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 17 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3264 Ahy-Chr16 149315492 149316533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3264 31 144 AP2-EREBP Transcription Factor Family AT1G19210 59.649 2.67e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy16g3264 AP2 1.40E-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3264 - - gmx:112999363 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3264 16 149315492 149316533 Ahy16g3264 16 149315492 149316533 ECH
Ahy16g3264 16 149315492 149316533 Ahy20g2130 20 119072557 119073443 ECH