Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3257 ATGGAATCGGAGGATTCGGTGAGACTAGAATTGGAAGAATTGCAGAAGCAATTGGGGAAGAAGCAAAGATTCGAAAGCGCTGTTTCCTCTCTCAAATCCATGCTTCAGAGCAAATATCTATCAGCTTCTCCATCTCTTCGTAAATCTTTTTATTCGGTTATATGCCGAGTTGCTACCGTGTTGAAGACTAGATATACGGCACCGGGTTTCTGGAATGCTGGCCTAGGCCTGTTTGAGCAGGCTCAATTACTTGTTACTGAGCCTTCTGAGAAGGAGCACTTGAAGACTTGCATTGCTCAGGCCAGGGAACACTTGCATTTAGAAGATAACCCATCACAAACCTCGCAGCCTGCAGCGCAGAATAATACGAATGGAGGATATCTTTTCGAGGGGCATCTTACTGTAGATCCCGAACCTCCTCAGCCTCAATGGTTGGTGCAGTCAAACCTCTTGTCAACTGCTGCTACTTTGTTTGCTGCTGAATCCTCTCAAGGTTCGGCAGCGACCGATACCACACCAGAGAATGCAGCTAATGTGCTTCAAGAGCTTATAAATAGATTGGAAGAAGTCATGCCCCTGATGATTGAAGATGGTCCTGTGGCTCCAAGGGCCCCTCCTGCCAGTAAAGAAGTCGTGGCGAGACTTCCTGTCATTACTCTCACAGAGGAAATACTGGCTAAGCTGGGGAAAGATGCAGAGTGTGCAATTTGCAGGGAGAACCTGGCTGTAGATGACAAAATGCAAGAGTTACCTTGCAGGCACACTTTCCATCCACCGTGTCTAAAACCATGGCTGGATGAACACAATTCTTGTCCGATATGCCGGTATGAGCTGCAAACTGATGATCATGCCTATGAGAGCTGGAAGGAAAGGGAAAAGGAAGCTGAGGAGGAGAGGAAAGGTGCTGAAAATGCCGTTAGAGGTGGTGAATATATGTATGTCTAG 945 0.4698 MESEDSVRLELEELQKQLGKKQRFESAVSSLKSMLQSKYLSASPSLRKSFYSVICRVATVLKTRYTAPGFWNAGLGLFEQAQLLVTEPSEKEHLKTCIAQAREHLHLEDNPSQTSQPAAQNNTNGGYLFEGHLTVDPEPPQPQWLVQSNLLSTAATLFAAESSQGSAATDTTPENAANVLQELINRLEEVMPLMIEDGPVAPRAPPASKEVVARLPVITLTEEILAKLGKDAECAICRENLAVDDKMQELPCRHTFHPPCLKPWLDEHNSCPICRYELQTDDHAYESWKEREKEAEEERKGAENAVRGGEYMYV* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3257 314 MobiDBLite consensus disorder prediction 294 314 - -
Ahy16g3257 314 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 8 308 - -
Ahy16g3257 314 Coils Coil 285 305 - -
Ahy16g3257 314 SMART ring_2 234 274 IPR001841 -
Ahy16g3257 314 SUPERFAMILY RING/U-box 228 281 - -
Ahy16g3257 314 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 199 281 IPR013083 -
Ahy16g3257 314 PANTHER ABI3-INTERACTING PROTEIN 2-1 8 308 - -
Ahy16g3257 314 Pfam Ring finger domain 233 275 IPR001841 -
Ahy16g3257 314 ProSiteProfiles Zinc finger RING-type profile. 234 275 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3257 Ahy-Chr16 149179885 149182772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3257 7 314 C3H Transcription Factor Family AT5G20910 65.696 2.29e-138 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3257 K16274 - gmx:100798732 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3257 16 149179885 149182772 Ahy16g3257 16 149179885 149182772 ECH