Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3250 ATGGGGTACCTCAATTCAGTTTTGACATCTTCAAGTCAGGTTCATGCAGCAGAAGATTCACCCGTGAGTGGTGGAGGACTCAGTCAGAATGGAAAATTCAGCTACGGGTATGCTAGCTCTCCGGGCAAGAGATCTTCGATGGAAGATTTTTATGAGACTAGAATTGATGGTGTGGATGGTGAAATCGTTGGCCTTTTCGGAGTTTTTGATGGTCACGGTGGTGCTCGTGCTGCCGAGTATGTCAAACAACATCTATTTAGTAATTTGCTCAGACATCCAAAATTCATTTCCGACACTAAATCTGCAATAGCTGATGCATATAACCACACAGACTCTGAATTTCTGAAATCAGAAAATAACCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATTCTAGTTGGTGACCGTTTGCTCGTTGCTAATGTCGGGGACTCTAGAGCTGTTATATGCAGGGGTGGAAATGCCATAGCTGTTTCCCGAGATCACAAGCCGGACCAAACGGACGAGAGGCAAAGGATTGAAAATGCTGGTGGCTTTGTTATGTGGGCTGGAACCTGGAGAGTTGGTGGCGTTCTTGCCGTTTCTCGTGCTTTCGGTGATAGACTTCTGAAACAGTATGTTGTTGCTGATCCAGAAATCCAGGAAGAAAAAGTTGATAGCTCTCTCGAGTTTCTTATCTTGGCCAGTGACGGGCTATGGGATGTTGTCTCCAACGAGGAAGCTGTTGCAATGATAAAGAAAATAGATGATGCAGAGGAGGCGGCAAAGAAGTTGATGCAAGAAGCATATCAGAGAGGTAGTTCCGACAACATTACTTGTGTTGTGGTTCGTTTCTTGACGAACCAAGGCGCTGCTTCTGGTACTAGCTCCGGCTAA 882 0.4558 MGYLNSVLTSSSQVHAAEDSPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGARAAEYVKQHLFSNLLRHPKFISDTKSAIADAYNHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIENAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKKIDDAEEAAKKLMQEAYQRGSSDNITCVVVRFLTNQGAASGTSSG* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3250 293 SUPERFAMILY PP2C-like 28 280 IPR036457 -
Ahy16g3250 293 Gene3D - 26 285 IPR036457 -
Ahy16g3250 293 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Ahy16g3250 293 PANTHER ALPHABET, ISOFORM E-RELATED 3 287 - -
Ahy16g3250 293 SMART PP2C_SIG_2 45 280 IPR001932 -
Ahy16g3250 293 Pfam Protein phosphatase 2C 63 273 IPR001932 -
Ahy16g3250 293 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Ahy16g3250 293 Coils Coil 243 263 - -
Ahy16g3250 293 CDD PP2Cc 33 280 IPR001932 -
Ahy16g3250 293 SMART PP2C_4 24 278 IPR001932 -
Ahy16g3250 293 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 3 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3250 Ahy-Chr16 149073182 149077984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3250 1 292 PP2C-type Phosphatase Gene Family AT4G31750 89.726 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3250 K17506 - gmx:100795017 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3250 16 149073182 149077984 Ahy16g3250 16 149073182 149077984 ECH