Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3233 ATGGTTTCTTCTCTGCTTTTGCTTCTTCTTACCCTTTTCCCTTCAAATGTTCACCCATTACATTTCAATATAACAGATTTCAGTGATGTTGAGAGTGCAAGCAAAGATATGGCATATGAAGGTGATGCCAAAGTTGCCAACGGGTTCATAGAGCTCAACAGGTATGACTACTATCGAACCGGCCGAGCCGTTTACAGCCAGCCTTTGCACCTTTGGGATTCATCCTCTAAGATTCTCACAGACTTCACAACCTCCTTTAGATTCACTATTCAAGGACCAGAATCCAATAGCAGTGATTATAATGTACTTGCTGATGGATTTGCCTTCCACATGGCTCCTTTGAATTTCACAACTCCACCCAACTCAGCTGGTGGCAATTTTGGACTATTCAACCTTTCCACACATTTTGGCATACCCCAAAATCAAATGTTTATGGTGGAATTTGACACATTCCAAAATAAAGATTATGATCCTCTAGAGCTAGAGCACCATGTTGGGATCAACGAAAATTCTGTCAAATCCATCAAGTATACTAAGTTTGATATTGAAGGAAACATTGGGAAACAAGGTCATGCTTTAATTACCTATAATTCTTCTACCAAGAACCTTGTTGTGTCTTGGTCTTTCAATGGAGCTAGCACTCATACTCTGTCTTGTGAGATTGACCTCTCCAAAATCCTACCAGAGTATGTGACAGTTGGATTCTCAGCTGCAACTGGCCACCGCTCGAACACACAACACAACATTCATTCTTGGGAATTCAATTCAACTTTGGATTCCACCGATTCTGAGGTAAACAGAAAGAAGAGGCAAAAAAGGATCATAGAAATTGTTGCACTGACTTGCTCAATAATTGTATTGGTGCTTATGGTATGTGTTTGTCTTATCAAGAAAAGAATTGCCAAGCTTCTACATGATGATCAAGTATCAGTCGCCAATGACTTGGACGAAGCATCACTACCTAGAAGATTCAAGTACAAGGAACTAGTTCAAGCCACCAATGAGTTCTCAAATGATAGAAAGCTTGGAAGTGGAGGATCAAGTCAAGTTTACAAAGGTTTTCTAAGTCACTCAGGACGTGCAGTCGCAGTGAAGAGGATTTTCGCTGATATTCAAGGAGGTGAGAAAATATTCATCAATGAAGTGAAGATAATAAGCCGTCTTATACACAGAAACTTGGTGCAATTCATAGGGTGGTGCCACAACAAACAAGAGTTCTTCCTAGTTTTCGAGTACATGCCTAATGGAAGCCTAGACACTTATCTCTTTGGAACAAGAAGAGCTCTGCCTTGGGATGCAAGGTACAAGATAGCTTTAGGTGTGGCCACGGCGCTTCATTATCTTCATGAAGATGCAGAACAATGTGTGCTTCATAGAGATATTAAGTCTGCTAACATTCTATTGGACACAGATTTTAGCACCAAGCTTTGTGATTTTGGCATGGCAAAATTGGTAGACCCAAGATTGAAGACTCAAAGGACAGGAGTTGTAGGGACATATGGGTACTTGGCACCAGAATATCTCAATGGAGGAAGGGCTAGCAAAGAATCAGACATATATAGTTTTGGGATTGTAGCTTTGGAAATTGCATGTGGAAGGAAGACTTACCAAGATGGAGAATATCATATTCCTCTAGTGAAGTGGGTATGGCAACTCTATGTGGAAGGGAATATTCTGAATGTTGCTGATGAAGGATTGAACAATAATTTTGATGAACTTCAAATGACATGCTTGCTAATTGTGGGACTATGGTGTACCAACCCGAATGACAAGGAAAGGCCGAAAGCAGCACAAGTGATCAAGGTTCTTCAACTTGAATCGCCGCTACCTGAGCTTCAACATGATATGCATGATCATCCTCTTCAACCAACCATGGTGAAGTTTAGAACTTCTTTTCAATCATCATCCATCAGCAATAGCCTTGTTATTGATGGACGTTAG 1941 0.406 MVSSLLLLLLTLFPSNVHPLHFNITDFSDVESASKDMAYEGDAKVANGFIELNRYDYYRTGRAVYSQPLHLWDSSSKILTDFTTSFRFTIQGPESNSSDYNVLADGFAFHMAPLNFTTPPNSAGGNFGLFNLSTHFGIPQNQMFMVEFDTFQNKDYDPLELEHHVGINENSVKSIKYTKFDIEGNIGKQGHALITYNSSTKNLVVSWSFNGASTHTLSCEIDLSKILPEYVTVGFSAATGHRSNTQHNIHSWEFNSTLDSTDSEVNRKKRQKRIIEIVALTCSIIVLVLMVCVCLIKKRIAKLLHDDQVSVANDLDEASLPRRFKYKELVQATNEFSNDRKLGSGGSSQVYKGFLSHSGRAVAVKRIFADIQGGEKIFINEVKIISRLIHRNLVQFIGWCHNKQEFFLVFEYMPNGSLDTYLFGTRRALPWDARYKIALGVATALHYLHEDAEQCVLHRDIKSANILLDTDFSTKLCDFGMAKLVDPRLKTQRTGVVGTYGYLAPEYLNGGRASKESDIYSFGIVALEIACGRKTYQDGEYHIPLVKWVWQLYVEGNILNVADEGLNNNFDELQMTCLLIVGLWCTNPNDKERPKAAQVIKVLQLESPLPELQHDMHDHPLQPTMVKFRTSFQSSSISNSLVIDGR* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3233 646 Pfam Protein kinase domain 337 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3233 646 PANTHER PUTATIVE-RELATED 5 619 - -
Ahy16g3233 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Ahy16g3233 646 ProSitePatterns Protein kinases ATP-binding region signature. 342 365 IPR017441 GO:0005524
Ahy16g3233 646 SMART serkin_6 336 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3233 646 Gene3D - 18 282 - -
Ahy16g3233 646 Gene3D Phosphorylase Kinase; domain 1 321 412 - -
Ahy16g3233 646 SUPERFAMILY Concanavalin A-like lectins/glucanases 19 261 IPR013320 -
Ahy16g3233 646 Gene3D Transferase(Phosphotransferase) domain 1 413 620 - -
Ahy16g3233 646 CDD lectin_legume_LecRK_Arcelin_ConA 20 258 IPR001220 GO:0030246
Ahy16g3233 646 Pfam Legume lectin domain 20 265 IPR001220 GO:0030246
Ahy16g3233 646 ProSiteProfiles Protein kinase domain profile. 336 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3233 646 PANTHER - 5 619 - -
Ahy16g3233 646 ProSitePatterns Legume lectins alpha-chain signature. 227 236 IPR000985 -
Ahy16g3233 646 SUPERFAMILY Protein kinase-like (PK-like) 320 627 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3233 Ahy-Chr16 148924337 148926497 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3233 1 616 Receptor kinase-like Gene Family AT5G10530 43.602 9.30e-176 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ahy16g3233 Pkinase 2.10E-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3233 - - vra:106763732 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3233 16 148924337 148926497 Ahy6g2534 6 110361745 110364750 hybridization