Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3212 ATGGCTGGTTGTTTGAGAGCTTCCTCAGCTACTTGTATTTTGGTCCTTTCTGTTGTGTTTGGAATATCTTATGCTGCTAAGGATATCTTGGTTGGAGGCAAGGTTGATGCATGGAAGGTTCCATCTTCACCCTCTGATTCCCTCAATAAATGGGCTGAGAGAGCTAGGTTTCAAGTCGGAGACCGTCTTGTGTGGAAATATGATGGTGGGAAAGACTCAGTGTTGGAAGTGAACAAAGAGGATTATGGGAATTGCAACACATCAAATCCAATTAAGAAGTTCAATGGCGGCAACACTAAGGTGGAGCTGGACCACCCTGGACCATTCTACTTCATAAGTGGAGCAAAGGGTAGCTGTGAGCAAGGTGAGAAGCTTCATGTGGTGGTCATGACTCCAAGGGGTGCACCTGCACCTTCACGGGCACATCCACATGCACCTTCTCCTGCTCCTTCACCTTCTTCAGGATTTGAAGAAGATCATACACCTGCCCCTGCTGTTGCTCCTTCAAGTGGTGGTGCCAACGCTTTGGAGTCCGGCATTCTTATGACTCTTATTGGGGTTTTTGCCATGTGGGTTTTCTAA 582 0.4725 MAGCLRASSATCILVLSVVFGISYAAKDILVGGKVDAWKVPSSPSDSLNKWAERARFQVGDRLVWKYDGGKDSVLEVNKEDYGNCNTSNPIKKFNGGNTKVELDHPGPFYFISGAKGSCEQGEKLHVVVMTPRGAPAPSRAHPHAPSPAPSPSSGFEEDHTPAPAVAPSSGGANALESGILMTLIGVFAMWVF* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3212 193 PANTHER BLUE COPPER PROTEIN 13 145 IPR039391 GO:0009055
Ahy16g3212 193 SUPERFAMILY Cupredoxins 26 130 IPR008972 -
Ahy16g3212 193 Pfam Plastocyanin-like domain 38 122 IPR003245 GO:0009055
Ahy16g3212 193 PANTHER EARLY NODULIN-LIKE PROTEIN 3 13 145 - -
Ahy16g3212 193 MobiDBLite consensus disorder prediction 133 171 - -
Ahy16g3212 193 Gene3D - 25 133 IPR008972 -
Ahy16g3212 193 ProSiteProfiles Phytocyanin domain profile. 27 131 IPR003245 GO:0009055
Ahy16g3212 193 CDD OsENODL1_like 27 130 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3212 Ahy-Chr16 148707149 148708132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3212 11 193 Phytocyanin Superfamily AT4G31840 47.541 4.46e-51 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3212 - - adu:107495656 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3212 16 148707149 148708132 Ahy16g3212 16 148707149 148708132 ECH
Ahy16g3212 16 148707149 148708132 Ahy6g2512 6 110128999 110130150 hybridization
Ahy16g3212 16 148707149 148708132 Ahy20g2091 20 117948546 117949597 PCT
Ahy16g3212 16 148707149 148708132 Ahy10g1644 10 95384983 95385876 PCT
Ahy20g2091 20 117948546 117949597 Ahy16g3212 16 148707149 148708132 PCT
Ahy10g1644 10 95384983 95385876 Ahy16g3212 16 148707149 148708132 PCT