Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3200 ATGGATTCAACATGCGTTGATACTTCACTCAACCTCAATCTTTCTCCTTCTCCAACTCATATGAACCCTACTGTGGAAGTAGTTTTGGTTGAAGAGTTACATCGTTTGAGTTGTGAGAACAAGAGGCTTACGGAAACGTTGACTCACATGTGCGTTAGCTATGAAGCTTTGCAAAAGCATTTGACCAAATTGATGAACACATCATCTGATTGTTATAATCATCATCAATCGCGGAAGAGAAAAGCTGAAAGCTATGAAAATTGTAACGATGAGGAGGAGTCATTATTACTCATCAAAAGGCCTAATAACATTGTTCATAATAATAATAATAAGGTTTCCAAGGTTCTTGTGAAGACAGATGCATCTGATTCTAGCTTGTATGTGATGGATGGATATCAATGGAGGAAATATGGTCAAAAGGTGACTAGAGACAACCCTTCTCCAAGAGCGTACTTTCGTTGCTCCTTCGCCCCAAGTTGCCCAGTGAAAAAGAAGGTGCAAAGAAGTGTTGAAGACCCAACAATACTTGTAGCAACGTATGAAGGAGAGCACAACCATGGTCGTAGCCAAACTGAAATATCACTTGTCTCATCCCAAAGCCATTCAAGTGAAACAATAATCCCTTTAGTTTCTTCACCATCATCACGCATTACGTCATCTCCAACTACTCTTGACTTGGTCAAAAATTCAATAAGTTCCGTTGACATTGATCACAATGCTCAAAAGAAGTCTTCTTCTATTTCTTCTTCTATCCATAAGTTTTTGGTTCAAGAAATGGCCACTTCCTTGACAAGTGATCCTAACTTCACGGCAGTACTTGCCACTGCAATTTCAGGAAAAATTCTAGAACACACTTCTCTGGAAAAATTGTGA 873 0.3906 MDSTCVDTSLNLNLSPSPTHMNPTVEVVLVEELHRLSCENKRLTETLTHMCVSYEALQKHLTKLMNTSSDCYNHHQSRKRKAESYENCNDEEESLLLIKRPNNIVHNNNNKVSKVLVKTDASDSSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQRSVEDPTILVATYEGEHNHGRSQTEISLVSSQSHSSETIIPLVSSPSSRITSSPTTLDLVKNSISSVDIDHNAQKKSSSISSSIHKFLVQEMATSLTSDPNFTAVLATAISGKILEHTSLEKL* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3200 290 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 283 IPR044810 GO:0003700
Ahy16g3200 290 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 283 - -
Ahy16g3200 290 Pfam WRKY DNA -binding domain 130 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy16g3200 290 ProSiteProfiles WRKY domain profile. 130 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy16g3200 290 Gene3D WRKY domain 111 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy16g3200 290 SUPERFAMILY WRKY DNA-binding domain 127 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy16g3200 290 SMART WRKY_cls 128 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3200 Ahy-Chr16 148510557 148512497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3200 3 289 WRKY Transcription Factor Family AT1G80840 43.631 1.13e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy16g3200 WRKY 1.40E-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3200 - - gmx:100810978 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3200 16 148510557 148512497 Ahy6g2501 6 109974568 109976686 hybridization