Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3181 ATGGCTACACCACATGATGAAAATAATGGAACAGTTTCAATTTCAAGGGTTGTGTGTGTGCATCCAAAGATTGAACAACCTCATAGGGTGTTAAGCCTCTCAAATTTGGATAGGCAGTGTCCAAGACTTATGCAATTGGTGTTCTTCTACAACAACTTGATGAAGAACGATTTGTCCCTCAATTCAGTGTTCAACAGCTTGAAAATTGGGTTGGAAGAGACCTTGATTATGTGGTACCCGGGTGCTGGAAGGTTGATGATGATGATGAACCCTAATAATAATAATAATAATAATAATAATAATCAAAGTGATGGAAAGCTCAATCTTTGGTGCAATAATGAAGGTGCAATTCTTGTGGAGGCTGAGACCAAAGCTAGAATCTCACAACTTGGGGATCTTTCTCAGTACAATGAGTTCTTCGAGAATCTTGTTTATAAGCCTGATTTTGATCCCAATTTCTCAAACATGCCTTTGATTGTTGCTCAGGTAACAAAATTTGGTTGTGGAGGGTATTCAATTGGCATTGGAACAAGCCACTCACTATTTGATGGACCAGCAACCTATGATTTCTTGTATGCATGGGCTTCAAATTCTGAAATTATGAAGGCTATTACAGCTAAGCCTCTTGAGCTTCCAAAACCAGTGCATGAGAGGGGAATACTTCTAAGTAGTGGTAATAATAATAAGCAACAACTTTCAAAAGGGTCTCTGAATTTACCTTCAAGTTCGAATTTTTATGCTCATGATGAGCATAATAATCAACCAATTAGGGCTATGGCAGTACAACATTTATATCAACTCATAATGCAAGCAACTGCAGCAGCTACACTACTTCAAAGTAGAAGTGATGAACCCTCCGAAAATAATTATCAAGAGAAGTGGGTTCTTAAGACCTATCATCTATCTGCTGCAATGATAGATAACTTGAAAAGGAAGTACTTATCTTCCATCAAGACAGGATCTCTTCCATTCTCAACCTTTGAGGTTCTTACAGCTCATCTCTGGAAGGCAAGGACAAAAGCTTTAGGGCTGAGCAAAGAGAAGGTAGTATGCCTTCAATTTGCAGTGGACACAAGGAACAAGATGGTGCCTCCATTACCAAAAGGCTTCAGTGGTAATGCTTATGTTCTTGCCTCACTTATGATGTCTGTGTCACAATTATTGGACCATTCTTCCCATGAATTGATCATTGAGAAAATAAGAGAAGCCAAAAATGCTGTGAACCATAGCTATGTCAAATCATACATTGATGCATTGGAGTTAGGCTCTAATAATTCTCTGCCTCCACTTAAGGAACTAACTCTTGTTAGTGATTGGACGAGAATGCCCTTCCATAACATTGAGTTCTTTCATGGAAGAAAAGCAGCTTATGCTTCTCCACTTGCCACTCCTGTTCCTCAGGTTGCTTATTTCATGCAGAGTCCATTTGATGTTGGTGGTGTTGACCTTAGGATCGGCTTTCAAGATGGAATAACCCTAAGTGCTTTTACCCAATGTTTCTTAACCTAA 1509 0.3903 MATPHDENNGTVSISRVVCVHPKIEQPHRVLSLSNLDRQCPRLMQLVFFYNNLMKNDLSLNSVFNSLKIGLEETLIMWYPGAGRLMMMMNPNNNNNNNNNNQSDGKLNLWCNNEGAILVEAETKARISQLGDLSQYNEFFENLVYKPDFDPNFSNMPLIVAQVTKFGCGGYSIGIGTSHSLFDGPATYDFLYAWASNSEIMKAITAKPLELPKPVHERGILLSSGNNNKQQLSKGSLNLPSSSNFYAHDEHNNQPIRAMAVQHLYQLIMQATAAATLLQSRSDEPSENNYQEKWVLKTYHLSAAMIDNLKRKYLSSIKTGSLPFSTFEVLTAHLWKARTKALGLSKEKVVCLQFAVDTRNKMVPPLPKGFSGNAYVLASLMMSVSQLLDHSSHELIIEKIREAKNAVNHSYVKSYIDALELGSNNSLPPLKELTLVSDWTRMPFHNIEFFHGRKAAYASPLATPVPQVAYFMQSPFDVGGVDLRIGFQDGITLSAFTQCFLT* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3181 502 Gene3D - 8 232 IPR023213 -
Ahy16g3181 502 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 502 - -
Ahy16g3181 502 Gene3D - 271 498 IPR023213 -
Ahy16g3181 502 Pfam Transferase family 13 489 - -
Ahy16g3181 502 PANTHER BRASSINOSTEROID-RELATED ACYLTRANSFERASE 1 9 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3181 Ahy-Chr16 148174298 148178156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3181 12 488 Monolignol Biosynthesis Gene Families AT5G48930 24.587 3.20e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3181 K15400 - gmx:100779295 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3181 16 148174298 148178156 Ahy6g2486 6 109720199 109724031 hybridization