Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy16g3180 | ATGGCAGTGATGGATGAAAAAGATCATCATTTTCCTAAAGGAATGCGTGTTCTTGCTGTTGATGATGATCGAACATGTCTTATAGTTTTGAAGACTTTACTCCAAAAGTGTCATTATCAAGTAACAACCACAAACAATGCAATAACAGCATTGAAGCTATTGAGAGAGAAGAAGAACAAGTTTGATCTGGTAATCAGTGACGTTCACATGCCAGACATGGATGGTTTCAAGCTTCTTGAGCTTGTTGGACTTGAGATGGACTTACCTGTCATAATGTTATCTGTAGATGATGATCCAAGAGTGATGATGAAGGGAATCATGCATGGAGCATGTTTCTATCTGGTGAAACCTGTTAGAATTGAGGAGCTGAAGAATATTTGGCAGCATGTAATTAGGAGGAACAAGAATGATTCCCAGGAGCCAGAAAAACCTAGTAACAACCACGAAAATCCTGATTCAGATCAGAGTTCAAAGGCAAATAAAAAGAGGAAGGAACAAGAAGAGGAAGAGGAAGAGGAGGAGGAGGATGAAAATGACCATGACAACGGTGATGATCCGTCGGCGCAAAAGAAGCCTCGCGTGGTTTGGTCCGTCGACTTGCACCACAAATTTGTCACTGCCGTCGAGCAATTAGGCATTGACAAGGCTGTACCTAAAAAAATTCTTGACTTAATGAATGTTGAAAAGCTTACAAGGGAGAATGTGGCAAGTCATCTTCAGAAATATAGGCTTTATCTGAGAAGAGTGAGCAACATGTCAAACCAACAACACTCTAACATTGGATCAGCCTTCAGCAGTGCAGACACATCATATCTGAGAATGAATCCTCTAAGCGGAATTGGACAATTACAAACACTCAATAATAACTCTGGTTATGGCTTAAGATCTTTTTCACCTTCTAACATGCTTAATAGATTCAACACTCCTTCAGCCCTCAATGCTCATGGTTTCAATTCCAATGATACCCAATTTCAGTTCCCATCTTCCGGCTTGCTCGGCCGCGGCCGCAGCAATAACAATCAGACTTATCTCTCCGGAGGAGGACTTAATTCTGTTCCAAACTTGAGCACTATCTTTGATTCTAAACAGAGTTTTGTTAGACAGAAACCAAGCTCTCCCATTTTGGGAGTTTCCAACAATGGTTTGATCTTGGAACAGAATCATCAAGGTGGAATCTATGATAATATTCCAAATTCTGTAGGATCTTCTTCCCAAGAACAAATTTCATTCCCTTCTTTACTTGATCATCATCATGGTAATAGTTGCAACAATGATATTTGGTCAAATGAATGCAACACTTTGATGAATTCTTCAACTTTTCAAGGTGGGAATCTTAGTGGTGCTTCATCAATCACTTCACTCTCTAGCCAATCCCATGATTCATTCACTGATTTGAATTTCCAAGGAGTGAATTTCACCAACAATAACAATAGTAACAATGTGCAATTTCAAGGGTGGAATAGTAACAATAATAACAATAATCAGAATGGAAATTACCATGCATTGAGTGGCCTTATTGATCCATTTTCAAATTCAAGCTTCAACAGAAACTTGGATTTTGATTTTTGTGATGCATCGCAAATGAAGCATGATGGGGTTATTGATTTGACTGAAGATTCTTCACTGAAGCCACATCAGTTGTACAAGACTCGGAACACTCACATTTCTAATAATGCTGGTTCCTTGGAAGACTTTGTCAATGAAATTATGAAACAGAATTGGTTATAG | 1728 | 0.3889 | MAVMDEKDHHFPKGMRVLAVDDDRTCLIVLKTLLQKCHYQVTTTNNAITALKLLREKKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVDDDPRVMMKGIMHGACFYLVKPVRIEELKNIWQHVIRRNKNDSQEPEKPSNNHENPDSDQSSKANKKRKEQEEEEEEEEEDENDHDNGDDPSAQKKPRVVWSVDLHHKFVTAVEQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLRRVSNMSNQQHSNIGSAFSSADTSYLRMNPLSGIGQLQTLNNNSGYGLRSFSPSNMLNRFNTPSALNAHGFNSNDTQFQFPSSGLLGRGRSNNNQTYLSGGGLNSVPNLSTIFDSKQSFVRQKPSSPILGVSNNGLILEQNHQGGIYDNIPNSVGSSSQEQISFPSLLDHHHGNSCNNDIWSNECNTLMNSSTFQGGNLSGASSITSLSSQSHDSFTDLNFQGVNFTNNNNSNNVQFQGWNSNNNNNNQNGNYHALSGLIDPFSNSSFNRNLDFDFCDASQMKHDGVIDLTEDSSLKPHQLYKTRNTHISNNAGSLEDFVNEIMKQNWL* | 576 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy16g3180 | 575 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 188 | 247 | IPR017930 | - | |
Ahy16g3180 | 575 | PIRSF | RR_ARR_type-B | 1 | 574 | IPR017053 | GO:0003677|GO:0003700|GO:0009736 | |
Ahy16g3180 | 575 | ProSiteProfiles | Response regulatory domain profile. | 16 | 131 | IPR001789 | GO:0000160 | |
Ahy16g3180 | 575 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR10 | 8 | 570 | - | - | |
Ahy16g3180 | 575 | Coils | Coil | 154 | 184 | - | - | |
Ahy16g3180 | 575 | Pfam | Myb-like DNA-binding domain | 193 | 243 | IPR001005 | - | |
Ahy16g3180 | 575 | Gene3D | - | 187 | 250 | - | - | |
Ahy16g3180 | 575 | SUPERFAMILY | Homeodomain-like | 189 | 248 | IPR009057 | - | |
Ahy16g3180 | 575 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 8 | 570 | IPR045279 | GO:0009736 | |
Ahy16g3180 | 575 | MobiDBLite | consensus disorder prediction | 168 | 182 | - | - | |
Ahy16g3180 | 575 | CDD | REC_typeB_ARR-like | 17 | 131 | - | - | |
Ahy16g3180 | 575 | Pfam | Response regulator receiver domain | 17 | 125 | IPR001789 | GO:0000160 | |
Ahy16g3180 | 575 | MobiDBLite | consensus disorder prediction | 134 | 167 | - | - | |
Ahy16g3180 | 575 | SMART | REC_2 | 15 | 127 | IPR001789 | GO:0000160 | |
Ahy16g3180 | 575 | SUPERFAMILY | CheY-like | 13 | 136 | IPR011006 | - | |
Ahy16g3180 | 575 | MobiDBLite | consensus disorder prediction | 134 | 190 | - | - | |
Ahy16g3180 | 575 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 191 | 244 | IPR006447 | GO:0003677 | |
Ahy16g3180 | 575 | Gene3D | - | 14 | 151 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy16g3180 | Ahy-Chr16 | 148165598 | 148168520 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy16g3180 | 11 | 409 | Response Regulator Gene Family | AT4G31920 | 50.611 | 2.00e-105 | 326 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-ARR-B | Ahy16g3180 | Response_reg | 3.60E-21 | CL0304 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy16g3180 | - | K14491 | adu:110273068 | 1036.56 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy16g3180 | 16 | 148165598 | 148168520 | Ahy16g3180 | 16 | 148165598 | 148168520 | ECH | |
Ahy16g3180 | 16 | 148165598 | 148168520 | Ahy10g1622 | 10 | 93799459 | 93803383 | PCT | |
Ahy10g1622 | 10 | 93799459 | 93803383 | Ahy16g3180 | 16 | 148165598 | 148168520 | PCT |