Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3172 ATGGCAGAAATAGCAGTAAACCTTGTTGTTGACAAACTAATCCCATTACTAAAAAATGAGGCAAAGTTGCTGAGTGGCGTGCGTGGCCAAATCGAAAGGATCAGCGACGATCTACGGCTGATGCGAGCGTATCTGAGGGATGTAGATGCAAAGGCGGAGATGGAGGCAGAGAACTCTGATCAGAGCAGAAAGGAGTGGGTTGCTCAAATCAGACACGTTTCCATCCACATTCAAGATGTGATCGACCTTTACTTGTACAAGGTGGCCAACAATGATGATGACGACCACCACAATCGACGCCGTGGACGGCGAAACGCCGTTGCTGGGGTTCTGTGCAAAATTTGTGACTTGCTCAAAAGTTGTGTAGGGCGCCATGAGATTGCATCTGAGATTGGCGAAATCAGAGAGTCAATAAATAGACTGAAGGATGCAAGACAACTGTATGGCGACTCCAAAGCTGCTGCAGAATCAAGCGGCGGTCGCAGTTCATCACCGCAACGGCATTACCTTCGACTGCGAGCCAATTTTGCTGAGGAAGAAGAGCTTGTGGGGATTGAACATGCCAAGAAAGAGCTCAACAACTGGCTCTCAGAAGGCGGTGCTGCTCGCACAGTCATCGCCGTGGTGGGCGAAGGCGGACTTGGTAAAACGACTCTGGTGAGAAATGTATACAAGCAAGAACAACAAAAGCACTCTTTTGATTGTTATGGATGGGTGGATGTATCTCGCTCACTCAAAGGAGTGCAGTTGTTCAAGGCTTTGCTGCGGAGCTTTGGTGATATGAAAGGAAGCAATGTGGACAACAACCTTCATGCTTTGATTGAAGATACAAGAGAATACTTGAAAGAAAAGAAGTACTTAATAGTACTTGATGATGTTTGGGAAACAGAGCTTTGGGGAGCTGTGGAATTGGCATTGCCGAAAAATAATGGAATGATAATGATTACAACAAGAGACACGGGTGTTGCTGATTCTTGCAAAGTGTCAGCAAAAGTTCATACCTACCCACTGGAGCCTCTAGAACCCGAAAATGCCTTGAGACTCTTCCATTCGAAGGCATTTCAATCTGGTTCTAAGAATCTCTGTGAAGAGTTGATGAAACTATCTGAAGAGTTCACAAAAAAGTGTGACGGTGTGCCACTTGCAATTGTGGCTATAGCTTCTCTTCTGTCAACCAAGAAAGAAAGAGTCTCAGATTGGAAGGTGGTGTACAACAGCCTTCAATCAAAGCTTGCAAGCGATTCTCATCTTAAAGGTTACCATCAGGCACTGTCAGAAAGTTATCAGGATCTTAGTTACCACCTCAAGTCATGTCTCTTGTACTTTGGCCTTTTTCCCGAGCAATACGCAATCAAGAGGGCAAGGCTCATCAATTTGTGGATAGCTGAAGGGTTTGTGGAGTGCAGAGAGCACCAAACTCAACAAGAAGTTGGAGAAGAGTACTTAGCTGAGCTCATTGCTAGGAGCTTGGTTAAGGTAGCTTATGTGAACAGTTACAGCAGAGTTAGAAAGTGTAGAGTTCATGATTTAATGCATGACTTCATTGTCAAGAAATGTGAAGAGTTCAACTTCTGTCAAGTGAAGAAAGGTAGCCCATTTTGTTTTGATAAATGGAGTAGACGTTTATCAATTGGCACAAATGTTGACTTTGCTGATCTGAGAACAAGTGCTGATAGAAACCAATGTAGCTTGTTGCGTTCTTTCCTTCTTTATGATATTATAGATGAGGAGGAAACGATAAGCACTTTTGTGAACTCACTTTTCTCTAATTTCAAGCTCTTGGTGACACTGGACTTTGAGAAAATACCAATTGATCATGTTCCAGAAACAATTGGAAACTTTGTCCACTTGAAATACCTAAATTTAAGATATAGCAACATTGAGATCATCCCCGAATCCATCGGAAAGCTTCGAAACCTAGAGACTCTTGACCTAAAAGGGACCAATGTGAATGATCTTCCAGTGGAGATTTACTCACTTACAAAGCTGTGTTATCTTAATGTGCAGACAAAAGCGTGGAAAGGTGTAAAATTAAAGAGAGGGGTTGCAAATTTAACGGCTCTACAAAAATTAGCCGGGGTTGATGCAAGTGATGTTTTTGGGGAACTGAAGAATTTGAAGCAATTGAGGAGTTTGAAGATCGAAAATGTTGATAGAAAGGATGGAATGTGGTTGTGCAATGCTATAGAGAGCATGACCAATCTATGCTCATTGTTGATAAATGCCAAACACAATGAAATCCTTGAATTGGAGTCACTAACTAGTCCTCCTCCACACCTTGAGCGTCTTTACTTATATGGAGTAATGGTGCCAGATTGGGTTTTTAGACTCAAAAATCTTATCGGGTTGGAGTTGATACGGTTTAAATTCACACAAGACCAATTGTGTCTTGTAGGGCGCCACCTGCCAGAATTGATGCGACTTTATGTCCGCCCATTCGAGGGTGATGAATTAAACATCCAAAAGGGGTGGTTCGGGAAACTACGATCACTCACCCTAGCGGATTCAACATTGAAAGCTATTAGAATAGATGAAGGATCACTGCCTTGCCTCCAAGAGTTCTTTCTCGCACTTAGGAATTGGAATCTAGAAGCAGTACAAGTGCCAGATCATGTTCGGAAACTCATGCATGTTATATAG 2640 0.4284 MAEIAVNLVVDKLIPLLKNEAKLLSGVRGQIERISDDLRLMRAYLRDVDAKAEMEAENSDQSRKEWVAQIRHVSIHIQDVIDLYLYKVANNDDDDHHNRRRGRRNAVAGVLCKICDLLKSCVGRHEIASEIGEIRESINRLKDARQLYGDSKAAAESSGGRSSSPQRHYLRLRANFAEEEELVGIEHAKKELNNWLSEGGAARTVIAVVGEGGLGKTTLVRNVYKQEQQKHSFDCYGWVDVSRSLKGVQLFKALLRSFGDMKGSNVDNNLHALIEDTREYLKEKKYLIVLDDVWETELWGAVELALPKNNGMIMITTRDTGVADSCKVSAKVHTYPLEPLEPENALRLFHSKAFQSGSKNLCEELMKLSEEFTKKCDGVPLAIVAIASLLSTKKERVSDWKVVYNSLQSKLASDSHLKGYHQALSESYQDLSYHLKSCLLYFGLFPEQYAIKRARLINLWIAEGFVECREHQTQQEVGEEYLAELIARSLVKVAYVNSYSRVRKCRVHDLMHDFIVKKCEEFNFCQVKKGSPFCFDKWSRRLSIGTNVDFADLRTSADRNQCSLLRSFLLYDIIDEEETISTFVNSLFSNFKLLVTLDFEKIPIDHVPETIGNFVHLKYLNLRYSNIEIIPESIGKLRNLETLDLKGTNVNDLPVEIYSLTKLCYLNVQTKAWKGVKLKRGVANLTALQKLAGVDASDVFGELKNLKQLRSLKIENVDRKDGMWLCNAIESMTNLCSLLINAKHNEILELESLTSPPPHLERLYLYGVMVPDWVFRLKNLIGLELIRFKFTQDQLCLVGRHLPELMRLYVRPFEGDELNIQKGWFGKLRSLTLADSTLKAIRIDEGSLPCLQEFFLALRNWNLEAVQVPDHVRKLMHVI* 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3172 879 PANTHER DISEASE RESISTANCE PROTEIN RP 35 867 IPR044974 GO:0006952
Ahy16g3172 879 Gene3D - 340 432 IPR042197 -
Ahy16g3172 879 Gene3D - 166 333 IPR027417 -
Ahy16g3172 879 Pfam Rx N-terminal domain 5 96 IPR041118 -
Ahy16g3172 879 Gene3D Ribonuclease Inhibitor 561 878 IPR032675 -
Ahy16g3172 879 Gene3D - 434 518 IPR036388 -
Ahy16g3172 879 CDD RX-CC_like 2 138 IPR038005 -
Ahy16g3172 879 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 442 IPR027417 -
Ahy16g3172 879 PANTHER - 35 867 - -
Ahy16g3172 879 PRINTS Disease resistance protein signature 205 220 - -
Ahy16g3172 879 PRINTS Disease resistance protein signature 376 390 - -
Ahy16g3172 879 PRINTS Disease resistance protein signature 280 294 - -
Ahy16g3172 879 PRINTS Disease resistance protein signature 635 651 - -
Ahy16g3172 879 Pfam NB-ARC domain 186 429 IPR002182 GO:0043531
Ahy16g3172 879 Gene3D - 4 128 - -
Ahy16g3172 879 SUPERFAMILY L domain-like 506 866 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3172 Ahy-Chr16 148046936 148051428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3172 181 770 WRKY Transcription Factor Family AT5G45050 22.680 8.74e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3172 K13457 - qsu:111987192 583.948