Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3169 ATGAAGCTTCTTACAATAATGCTTCTCATGTTCTTCCTTATTCTCCACAAACCAAGTTTCGTTCTTTCTTCAACAATTGATTACCCTTTTGCTCCTTCACCTCAAATTCAAGTCATTTCTACATCAATGGCTTCTTCACCTTCATCCCCTGGTTTTGAACAAGAGAATGAAAAGCAGGGCATGGATTCACACAGGAAAATGGTGATAGCTTTTGTTGTTGCCAGCACTGCACTTAGTGCACTCATTTTATGCCTCTTATTCTTCTGGATTTATTATCATACAAGCCATTCATCAAAATCCAAAAGGACAAGTGTTCAAAACTCAGGGCAAGATGCTGAGAAAGGGGCATATTTGAGCAAATTTAGTTCTATAAAGATGGTGGGTAAGAAGGGTTGTGTTCCAATAATTGATTATAAGCAAATAGAAAAGGGCACAAATAATTTCAAGGAGAGTAATATTTTGGGGGAGGGTGGTTTTGGATGTGTTTATAAGGCTACTTTGGATGATAATTTGGATGTTGCTGTTAAAAAACTTCACTGTGAAAATCAATATGCTGAGACAGAATTTGAGAATGAGGTGGAATTGTTAAGTAAAATTCAGCATCCCAACATAATTTCTTTATTGGGTTGTAGCAATGATGGAATTACAAAGTTTATTGTCTATGAATTGATGCACAATGGATCATTGGAAACCCAATTACATGGACCTTCTCATGGCTCAGCATTGACTTGGCATATGAGGATGAAGATTGCTCTTGACACAGCAAGAGGATTAAAATATCTGCATGAGCACTGTTACCCTGCAGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTAGATGCAAACTTCAATGCAAAGATTTGTGATTTTGGGCTTGCCATAACTGATGGGTCCCAAAATAAGAACAACATCAAGCTTTCAGGCACATTGGGGTATGTAGCTCCAGAGTATCTTTTAGATGGTAAATTGACTGATAAAAGTGATGTGTATGCTTTTGGAGTTGTGCTTTTGGAGCTTCTATTAGGAAGAAAGCCTGTGGAGAAACTGGCACCATCACAATGCCAATCTATTGTCACATGGGCCATGCCACATCTCACAGACAGATCCATGCTTCCAACTATTGTGGACCCTGTGATTAAGGATGCAATGGATCTCAAGCACTTGTACCAGGTTGCTGCCGTGGCTGTGTTGTGTGTGCAACCGGAGCCGAGTTACCGGCCGCTGATTGCGGATGTTCTGCACTCACTTATTCCTCTTGTGCCTGTTGAGCTTGGAGGAACACTCAGAGTTTCACAAGTGACACAACAAGTTTTACCAATTGATGATGTTGCTGAGAATTCTAGTCACTCAATTTGA 1362 0.3957 MKLLTIMLLMFFLILHKPSFVLSSTIDYPFAPSPQIQVISTSMASSPSSPGFEQENEKQGMDSHRKMVIAFVVASTALSALILCLLFFWIYYHTSHSSKSKRTSVQNSGQDAEKGAYLSKFSSIKMVGKKGCVPIIDYKQIEKGTNNFKESNILGEGGFGCVYKATLDDNLDVAVKKLHCENQYAETEFENEVELLSKIQHPNIISLLGCSNDGITKFIVYELMHNGSLETQLHGPSHGSALTWHMRMKIALDTARGLKYLHEHCYPAVIHRDLKSSNILLDANFNAKICDFGLAITDGSQNKNNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLAPSQCQSIVTWAMPHLTDRSMLPTIVDPVIKDAMDLKHLYQVAAVAVLCVQPEPSYRPLIADVLHSLIPLVPVELGGTLRVSQVTQQVLPIDDVAENSSHSI* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3169 453 PANTHER BNAA04G14780D PROTEIN 37 440 - -
Ahy16g3169 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Ahy16g3169 453 SUPERFAMILY Protein kinase-like (PK-like) 129 418 IPR011009 -
Ahy16g3169 453 Gene3D Transferase(Phosphotransferase) domain 1 224 423 - -
Ahy16g3169 453 ProSitePatterns Protein kinases ATP-binding region signature. 154 177 IPR017441 GO:0005524
Ahy16g3169 453 CDD STKc_IRAK 154 421 - -
Ahy16g3169 453 Pfam Protein tyrosine and serine/threonine kinase 151 360 IPR001245 GO:0004672|GO:0006468
Ahy16g3169 453 PANTHER OS01G0750732 PROTEIN 37 440 - -
Ahy16g3169 453 Gene3D Phosphorylase Kinase; domain 1 108 223 - -
Ahy16g3169 453 ProSiteProfiles Protein kinase domain profile. 148 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3169 453 SMART serkin_6 148 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3169 Ahy-Chr16 148013799 148020760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3169 3 364 Receptor kinase-like Gene Family AT1G80640 46.448 5.69e-98 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Ahy16g3169 PK_Tyr_Ser-Thr 2.80E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3169 - - gmx:100812044 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3169 16 148013799 148020760 Ahy6g2469 6 109492140 109498466 hybridization
Ahy16g3169 16 148013799 148020760 Ahy20g2058 20 116106678 116110416 PCT
Ahy16g3169 16 148013799 148020760 Ahy10g1612 10 93258915 93262683 PCT
Ahy20g2058 20 116106678 116110416 Ahy16g3169 16 148013799 148020760 PCT
Ahy10g1612 10 93258915 93262683 Ahy16g3169 16 148013799 148020760 PCT