Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3165 ATGGGGGTTGTTGTGAAACTAAGGACTTGTAGCACACTACAAAGAAATGGTACTTTCAAAGACACTGGAGACATAGATATTGTAATTTCAATGTTTCGCTTCGTAGCGGGAAAACAACAAGTATATCAAGGAAAGAAGGAGGTTGCCCAGTTGTTGCCAATAGATTTCGATCGTTCGTTTAACAGTGAGGGTAAAGACTCGGTCGGGAGTGCCTCCAATGATAGTCGCGGACATTATTCTGCAAGTGATGATGAATACGACGACGACGATTACCTGGAGTGCAATGAAGGCCGCGAAAGCGGAGAGAAAATGGTAGGTGGTGCCGATGATGGTAATGGGTGGGGTGATGCGAATGATGCGGCAGAGGTTGGTCTCCGCCGGCCAGTAGTTGCTACGGACTTTTTGGGAAAAGAGTTTGCAACGGAGGATGATGCTTATGCTGCCTACAAGGAATTCGCTAAGTCAAGGGGTTTCGGAGTTCGGAAGGGAGACATAGCTCGTGTGAATGGGGTGTTGATTAGGAGAGACTTTTTTTGCCATCGACAAGGCACAAGACATGCTAAGCACTACGACCGTCCTGAGCGAGTAAGGGAGGAGAGGCTGGAGAGTCGCACGGACTGTAAGGCAAAGTTGAAGATTTACTATGATATGCAGCATAGTGTGTGGAGGGTCAGGACCATCGTGGACGAACACAACCACGAGCTTGCCCCGGCAGTGTTCGCACGTCTCATTCGTAGTCATCGGAAGATGAGTGACGGTGACAAGGCGCAGGTGGATAGTTTGAAGCAGTTTGGGATCGCCACGTCGAAAATAATGGCTTACATGGCGGGGCAATCTGGTGGGTATGGCATGCTCAGATTCACAAAACGGGATCTCTATAATTATGTTCATGGGCAAAGGGTTGCACGAATATGCGACGGCGACGCCGCCGCGACTATCAGCTACTTGGAGGGTAAGGCAAATGCTGACATGAGGACCGTGGCCCGTTACACACGGACCTCGGACAATCGTTTAGGAAGCCTAATTTGGGCCGACGGTGAGATGATCACGGATTATCATCTATTTGGTGACGTGTTGGCCTTTGATTCGACGTACCGATCTAACAAGTACAAGAAACCACTGGTGGTTTTTTCTGGGTCAAATCACCACAAACAGACATCAATATTTGGATTCGTATTGCTGAAGGATGAAGAGGTCCGCACCTATAGGTGGGTCTTGCTGAACCTGCTCGATGTTATGGGGCAAAAAAATCCTTGTGTAGTGGTGACCGACGGGGACAAGGCGATGCGCACTGCAATTGCGGAGGTGATGCCGACGGCGACACATAGACTATGTGGTTGGCACTTGGAGAAGAATTGCGTCCAGAGGGTGAAAGATCCTGAATTTCGCAAGGTGTTTAGGAAAGCAATTTATGCTAACTTTGAAATCAGCGAGTTTGAGGAGTACTGGAAGGCATCTGTCGAGTCACTTGGCCTAGAGGACAACAGTTGGGTTAAGTCCACGTATGAATCTAGTGAAAGTTGGGCAATGGCGTACCTTAGGGGAACATTTTGCGCAGGATACAGGACGACCTCAAGATGTGAAGGGATAAATGCTTTTGTTAAGGGCTTCCTTAAATCAACTGATAGCATTCTGGAGCTTGTGCATAGTTTGGATCGTGTTGTAAAGGACTATCGGAATAATGAAGTAATTGCCCAATTCCACTCCACCTACTATAGTTCGGTGCTGACCACCGGCCTTGATTCGATCGAGCGGTTTGCATCGAAGGTGTATACAAGAGCAGTATTCAGAGAAGTGAAGAAACAAATTAAGGCTGTGGCAACGCTATTGTTTCGGGCCAAGGACAGCATCAGCACAACAACTGTGTACACATTCTCGCGAATGGGAAAACCTAATAGAACACACAAGGTATTGGTTGACCCGAACGAGGGAAAAATAGAGTGTGAGTGTTCGATGTGGAACAGTGAAGGGATTCCCTGCAGTCATATCTTTTGTGCGATGAAGTACGAGGGTTTCGAAGAAATACCACCCGGTCTTGTTTTGAGAAGATGGAGCAAGGATGCAAAGGATTGTAGATTGACCGCTGCGGATAGTAAAGATGGTTCTGAAGGCCGTTTGCTTCGATATGGTGCTCTATGTGGGGCAATGAGTTTAGTTGCACAGCTTGGGTCGGAAGATGCTGCAGAGTTTGTTGTGGCTAGGGATGGAATTGCTAGTCTCACCAAAACGCTTCAGCAGAGATTCGTTGACAAGGTTGGCAGCAAACTTGGTCTATCGCCGGTGTCAGGAATCGAAGACCCCGTCGTATCGAAGACAAAAGGGGCACCGAGGAAGGGAAAGGAGTGTGTACCGATTAGCCAGGGAGAGAGGACGCCGAAGAGACGACGTTGTACCAACTGTGGGGAAGCCAGTCACACCAAGAGGACTTGCACGTGGCATCCGGGAGAGGGGGTTGCAGGCAATGATGATGCAGGCGGTCCAAGTTACATGGAGCATGATTCGCAAGATGCTGCTGCCCCTTGCGCAACACCAGAGGCACGTCATTGTCACACAAACGAGGTGGGAATGCAATCGGAGAGCGGCAACCATGGTGACACTGTCCCGGCGCACGCAGATGGGACGAATCCATGTATCGGTGTTGGAGGTGGGGGCCCTAACTTCTTCCTTGGCGGGCAACACATCGAGCAATTTTATTCCGCTAACAGTTGCTCGGGGCACACTGGTCAGCAGTCTTCACAGGCTCCCTGCCCGAGGTTAAGGAACCCCAGTGCGTGGACCAATGAGGAGTGGTTTGAGCGGTGGATGACACAGGGGCAACATCAGTTCTATGCATGTAACTTGTGA 2844 0.4951 MGVVVKLRTCSTLQRNGTFKDTGDIDIVISMFRFVAGKQQVYQGKKEVAQLLPIDFDRSFNSEGKDSVGSASNDSRGHYSASDDEYDDDDYLECNEGRESGEKMVGGADDGNGWGDANDAAEVGLRRPVVATDFLGKEFATEDDAYAAYKEFAKSRGFGVRKGDIARVNGVLIRRDFFCHRQGTRHAKHYDRPERVREERLESRTDCKAKLKIYYDMQHSVWRVRTIVDEHNHELAPAVFARLIRSHRKMSDGDKAQVDSLKQFGIATSKIMAYMAGQSGGYGMLRFTKRDLYNYVHGQRVARICDGDAAATISYLEGKANADMRTVARYTRTSDNRLGSLIWADGEMITDYHLFGDVLAFDSTYRSNKYKKPLVVFSGSNHHKQTSIFGFVLLKDEEVRTYRWVLLNLLDVMGQKNPCVVVTDGDKAMRTAIAEVMPTATHRLCGWHLEKNCVQRVKDPEFRKVFRKAIYANFEISEFEEYWKASVESLGLEDNSWVKSTYESSESWAMAYLRGTFCAGYRTTSRCEGINAFVKGFLKSTDSILELVHSLDRVVKDYRNNEVIAQFHSTYYSSVLTTGLDSIERFASKVYTRAVFREVKKQIKAVATLLFRAKDSISTTTVYTFSRMGKPNRTHKVLVDPNEGKIECECSMWNSEGIPCSHIFCAMKYEGFEEIPPGLVLRRWSKDAKDCRLTAADSKDGSEGRLLRYGALCGAMSLVAQLGSEDAAEFVVARDGIASLTKTLQQRFVDKVGSKLGLSPVSGIEDPVVSKTKGAPRKGKECVPISQGERTPKRRRCTNCGEASHTKRTCTWHPGEGVAGNDDAGGPSYMEHDSQDAAAPCATPEARHCHTNEVGMQSESGNHGDTVPAHADGTNPCIGVGGGGPNFFLGGQHIEQFYSANSCSGHTGQQSSQAPCPRLRNPSAWTNEEWFERWMTQGQHQFYACNL* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3165 947 Pfam SWIM zinc finger 636 663 IPR007527 GO:0008270
Ahy16g3165 947 Pfam MULE transposase domain 358 452 IPR018289 -
Ahy16g3165 947 PANTHER OS02G0262500 PROTEIN 133 691 - -
Ahy16g3165 947 MobiDBLite consensus disorder prediction 767 787 - -
Ahy16g3165 947 MobiDBLite consensus disorder prediction 63 77 - -
Ahy16g3165 947 MobiDBLite consensus disorder prediction 771 787 - -
Ahy16g3165 947 Pfam FAR1 DNA-binding domain 149 236 IPR004330 -
Ahy16g3165 947 ProSiteProfiles Zinc finger SWIM-type profile. 635 671 IPR007527 GO:0008270
Ahy16g3165 947 MobiDBLite consensus disorder prediction 63 91 - -
Ahy16g3165 947 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 133 691 IPR031052 GO:0006355
Ahy16g3165 947 SMART 26again6 646 673 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3165 Ahy-Chr16 147927511 147931601 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy16g3165 MULE 6.60E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3165 - - aip:107607194 1284.24