Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3125 ATGGTGGTTCCTCAGAAATTCAAAGCACAAAGAAGCAGATGCAGAAGGCAGAGACAGCGGCGGACGGTGGTTCTTCATGTGGCGGCGGCGAGGAGAGTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGGTGGTGCAGTGCCAGAGGGCGACAAGGCGGCGGCGGGACGGCGAGACTGCAGCGACGACGGAGGCTCCCGGGCGCCGTCCCCCTCCCCTCTTCCCTTCCCCTCCCCTCTCCTCCCCCTTCGATTCATAGCTATTTTGGTGAGGATTGATTTTCTATACTTAACGTACCAAAAGAGAAAACTCACCAAACTAAAAGAGAAATTCTTTAAGCAAAACGGTGGTCTTATTTTGCCACAACAACTCTCTACAAAAGAAGAGTCCTCTCATACTACTAAAATTTTTACTACCGAACAGTTGAAGAAGGCCACCAACAACTACGACGACAACCTAGTCGTTGGCAGGGGAGGTTTTGGCGCAGTGTACAAAGGACTTCTAGAGAATGACAAAGTTGTTGCCATCAAGAAGTCCAAAACAGTTAATCCTACACAAGTTGAGCAATTCATCAATGAGGTTATTGTTTTGTCCCAAATTAACCACAGAAATGTGGTGAAGCTTTTGGGTTACTGTTTAGAAACAGAAGTCCCTCTTCTTGTCTATGAGTTTGTAAGCAATGGCACACTCTTCGATTTTATCCATAATGAAAACAAGAGAAATAATTTCAATTGGGAAAATCGTCTGAGAGTTGCAGCAGAGGCAGCCGGAGCTTTATCATATCATCACTCAGCTGCTTCCATACCAATTGTCCACGGAGATGTTAAGAGTGTCAACATTCTCTTAGACGAAGATTTCACTGCCAAAGTCTCTGACTTTGGAACTTCTAGATTCATTCCACGGGATCAAGTTGCATTGGCTACAATGGTCCAAGGAACTTTTGGTTATTTGGATCCAGAATACATGCAAACCAGCCAACTCACCGAGAAAAGCGATGTGTATAGCTTTGGCGTTGTGCTGGCAGAGCTTCTTACAGGACAGAAAGCTCTTTCATTTGAGAGGCCGGAAGGGAAGGAAAATCTTGCTATCTACTTTCTATCTTGCCTGAAGGAGAATCGCTTGTTTGAAGCTCTTCAAGTTGGAATCTTGAATGAAGATAACAAGCAGCAGATTGTGGAAGTTGCTGATGTTACTGCAAAGTGTTTGAGACTCAAAGGGGAAGAGAGACCATACATGAAGGAAGTGGCAGTGAAATTGGAAGGAATAAGGGAAATGTCACAGCAACAATGGGTCAATAATGCGGACAACAATTTTGAAGAGACCCAATCTCCAAAAAGACATGATAGTATTACCAATGATGAAGAAGTCTTATTGTCTTTATCATATGAAAGGTGA 1398 0.4392 MVVPQKFKAQRSRCRRQRQRRTVVLHVAAARRVEEEEEEEEEEGGGAVPEGDKAAAGRRDCSDDGGSRAPSPSPLPFPSPLLPLRFIAILVRIDFLYLTYQKRKLTKLKEKFFKQNGGLILPQQLSTKEESSHTTKIFTTEQLKKATNNYDDNLVVGRGGFGAVYKGLLENDKVVAIKKSKTVNPTQVEQFINEVIVLSQINHRNVVKLLGYCLETEVPLLVYEFVSNGTLFDFIHNENKRNNFNWENRLRVAAEAAGALSYHHSAASIPIVHGDVKSVNILLDEDFTAKVSDFGTSRFIPRDQVALATMVQGTFGYLDPEYMQTSQLTEKSDVYSFGVVLAELLTGQKALSFERPEGKENLAIYFLSCLKENRLFEALQVGILNEDNKQQIVEVADVTAKCLRLKGEERPYMKEVAVKLEGIREMSQQQWVNNADNNFEETQSPKRHDSITNDEEVLLSLSYER* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3125 465 Gene3D Transferase(Phosphotransferase) domain 1 226 449 - -
Ahy16g3125 465 Gene3D Phosphorylase Kinase; domain 1 124 225 - -
Ahy16g3125 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Ahy16g3125 465 MobiDBLite consensus disorder prediction 1 20 - -
Ahy16g3125 465 CDD STKc_IRAK 156 423 - -
Ahy16g3125 465 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 86 442 IPR045274 GO:0007166
Ahy16g3125 465 ProSiteProfiles Protein kinase domain profile. 150 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3125 465 MobiDBLite consensus disorder prediction 32 75 - -
Ahy16g3125 465 SUPERFAMILY Protein kinase-like (PK-like) 128 420 IPR011009 -
Ahy16g3125 465 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 9 86 442 - -
Ahy16g3125 465 ProSitePatterns Protein kinases ATP-binding region signature. 156 179 IPR017441 GO:0005524
Ahy16g3125 465 Pfam Protein tyrosine and serine/threonine kinase 156 419 IPR001245 GO:0004672|GO:0006468
Ahy16g3125 465 SMART serkin_6 150 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3125 Ahy-Chr16 147317089 147327354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3125 48 431 Receptor kinase-like Gene Family AT1G21230 53.488 4.48e-137 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Ahy16g3125 PK_Tyr_Ser-Thr 1.10E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3125 - - ahf:112757813 858.981