Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3090 ATGACGTTGAAGGCCACAGTAGTACTACTCTTAATAGTTGTTGCACTAGTCCTTCTAGCAACAATTGCAGCAGATGATGGAAATAATCAAACCCTTGAAGGATGCAGAAGCGACTGTGGTGGTGTCCGAGTTCCATATCCATTTGGCATAGGGAACTCATCATCCGTCCCCCATAAAAGCTGTTTCTTGCAAAGTTCGTTTGAGCTGACATGCCCAAATTCAACTTTATACTGGGGAAATATCAAAGTCTTAGACATAAAAATTTCCCAGGCTAAAGTTGACATGTCGATTCCTATCTCAAGGATTTGTCGTGACGGTCATTATTATAGAGGAGTTTCCATAGATATTCCTTCTTTCACCATTTCTAGTGAAGACAACAAGTTCGTTAGTGTAGGTTGCGACACCTATGGCTATCTTCACAGCTCCTACAAAGACGACGATAATGCAACATATTCAACAGGGTGCATAACAAGATGTTATGGCAGTTCTATGGAAGTTGAGGATGGACATTGTTCTGGGATTGGGTGTTGTCAGGTGGATATTCCGCCTAAAATGAGGATGACCTTTGTCAAGTCATTTTCCTTTTACAATTTCAGCCAAACTTGGAGATTCAACAACTGCAGCTATTCTTTTGTTGTCAAAAAAGAAAACTACACATTTTACAGGGAACACTTGAGAAACCTGCCTTTTGAGGAATTCCCTGTGGTGTTTGATTGGAGTGTTGGAGATGAAACACGTGAAGCTTCTCGGAAAAGAGGTACCAGTTACGCTTGCAAGGGAAACACCACTCGTAATGACTCTGTCCCTACTGGATATGGTTACATATGCCAATGCAATAAAGGTTTTGAAGGAAATCCTTACCACCCTCTTGGCTGCATAGACATTGATGAATGCAAGACAGGACAACATTCATGTGTAAGTGACCATAATTGTCACAATACAAATGGATCCTACACATGCTTCTGTCCTAAGGGGCAATCTGGAAATGGTACAAGTGCAGGATTCATAGCTATTTTCGTAGGGACTTGTTTGCTATACTTAGCGCACCAAAAGAAAAAACTCATCAAACTGAAGGAAAAGTTTTTTGAGCAAAACGGCGGTCATATTTTAGTACAACAAGGAGAAGAGTCATCCCATGTTAAAATTTTCACTGCTGACAAATTAAAGAAAGCCACTAACAACTATGACGAGAAGTTAATCATTGGCAGGGGAGGTTATGGCACGGTTTTCAAAGGAGTTCTAGAGAATAACACAATTGTTGCTATCAAGAAGTCCAAAATAGTTGATCCTGGCCAAGTTATGCAATTCATCAATGAGGTGATTGTTGTCTCTAAAATTAACCACAGAAATGTGGTGAAGCTTTTGGGTTGTTGTTTAGAAACAGAAGTTCCTCTGCTAGTCTATGAGTTTGTAAGCAATGGTACACTCTTTGATTTCATCCATAATGAAAAGAAGAGAAATCATTTTAACTGGAAAAATCGTCTCAGAATTGCAGCAGAGGCGGCTGGAGCTTTATCATATCTTCACTCATCTGCTTCCATTCCAATTGTCCACAGAGATGTTAAAAGTGCTAATATTCTCTTAGACGAAGACTACACTGCTAAAGTCTCTGACTTTGGAACTTCTAGATTTGTTCCATTGGATCAAACTGCACTAGCTACAATGGTGCAAGGAACTTTTGGTTACTTGGATCCAGAGTACATGCAAACTAGCCAATTAACTGAGAAAAGCGATGTGTATAGTTTTGGTGTTGTGCTGGCTGAGCTTCTTACAGGAAAGAAACCTCTTTTGTTGGGGAAGTCGAAAGAGAAAACAAATATTTCTATCTACTTTCTATCTTGCCTAGAAGAGAATTGCTTGTTTGAAACTCTTCAAGATGGAATCTTGAATGAAGAAAACAAGCAAGAGATTGTGGAAGTTGCTAATATTACAGCAAAGTGTTTGAGACTTAAAGGAGAAGAAAGACCAAGCATGAAGGAAGTGGCAATGGAATTGGAGGGAATAAGGAGAATGTCAAAGCATCAATGGGTTAACAGTGGAGACAAAAATTTTGAAGAGACGCAGCACTTACTTCCTATATCATCATCGTCGAAAGGATATGAGTATGGTGATAGCAGTAGTAGTAGTCATCAAAATATAAATTATGATAGTATCATCAGGGATCAAGAAGGGGTAATTGCTTTAGCAGATGGAAGGTGA 2199 0.3934 MTLKATVVLLLIVVALVLLATIAADDGNNQTLEGCRSDCGGVRVPYPFGIGNSSSVPHKSCFLQSSFELTCPNSTLYWGNIKVLDIKISQAKVDMSIPISRICRDGHYYRGVSIDIPSFTISSEDNKFVSVGCDTYGYLHSSYKDDDNATYSTGCITRCYGSSMEVEDGHCSGIGCCQVDIPPKMRMTFVKSFSFYNFSQTWRFNNCSYSFVVKKENYTFYREHLRNLPFEEFPVVFDWSVGDETREASRKRGTSYACKGNTTRNDSVPTGYGYICQCNKGFEGNPYHPLGCIDIDECKTGQHSCVSDHNCHNTNGSYTCFCPKGQSGNGTSAGFIAIFVGTCLLYLAHQKKKLIKLKEKFFEQNGGHILVQQGEESSHVKIFTADKLKKATNNYDEKLIIGRGGYGTVFKGVLENNTIVAIKKSKIVDPGQVMQFINEVIVVSKINHRNVVKLLGCCLETEVPLLVYEFVSNGTLFDFIHNEKKRNHFNWKNRLRIAAEAAGALSYLHSSASIPIVHRDVKSANILLDEDYTAKVSDFGTSRFVPLDQTALATMVQGTFGYLDPEYMQTSQLTEKSDVYSFGVVLAELLTGKKPLLLGKSKEKTNISIYFLSCLEENCLFETLQDGILNEENKQEIVEVANITAKCLRLKGEERPSMKEVAMELEGIRRMSKHQWVNSGDKNFEETQHLLPISSSSKGYEYGDSSSSSHQNINYDSIIRDQEGVIALADGR* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3090 732 ProSitePatterns Calcium-binding EGF-like domain signature. 294 320 IPR018097 GO:0005509
Ahy16g3090 732 ProSiteProfiles Protein kinase domain profile. 395 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3090 732 SUPERFAMILY EGF/Laminin 292 329 - -
Ahy16g3090 732 Gene3D Transferase(Phosphotransferase) domain 1 471 690 - -
Ahy16g3090 732 Gene3D Phosphorylase Kinase; domain 1 369 470 - -
Ahy16g3090 732 Pfam Protein kinase domain 396 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3090 732 Pfam Wall-associated receptor kinase galacturonan-binding 35 92 IPR025287 GO:0030247
Ahy16g3090 732 SUPERFAMILY Protein kinase-like (PK-like) 381 692 IPR011009 -
Ahy16g3090 732 ProSiteProfiles EGF-like domain profile. 294 332 IPR000742 -
Ahy16g3090 732 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 15 693 IPR045274 GO:0007166
Ahy16g3090 732 Pfam Calcium-binding EGF domain 294 327 IPR001881 GO:0005509
Ahy16g3090 732 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 311 322 IPR000152 -
Ahy16g3090 732 CDD EGF_CA 294 328 - -
Ahy16g3090 732 ProSitePatterns Protein kinases ATP-binding region signature. 401 424 IPR017441 GO:0005524
Ahy16g3090 732 SMART serkin_6 395 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3090 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 516 528 IPR008271 GO:0004672|GO:0006468
Ahy16g3090 732 SMART egfca_6 294 344 IPR001881 GO:0005509
Ahy16g3090 732 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 15 693 - -
Ahy16g3090 732 CDD STKc_IRAK 401 668 - -
Ahy16g3090 732 Gene3D Laminin 250 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3090 Ahy-Chr16 146640277 146644023 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3090 30 718 Receptor kinase-like Gene Family AT1G21230 44.687 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Ahy16g3090 Pkinase 1.80E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3090 - - adu:107495457 863.988