Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3015 ATGGGACTAAGTGGGAGAATTGATGTTGACACATTATTTGAGTTATCAAATTTGACAAGCTTCAGTGTCATAGGAAATAACTTTGAGGGTCCAATGCCTGAATTCAAGAAGATTGTGTGGTTAAGAGCTTTGTTTCTTTCTAATAACAAATTCTCCGGTGACATTGCTGATGATGCTTTTGAGGGTATGAAAAGATTGAAGAAGGTGTACTTGGAAGAGAATGAGTTGAGTGGCAACATAAATCTATGTGGAAAGCCTATGAACAAGAGCTGCAACGCCGATCCTAACGTGACCTTTGACTCCCCTTCTCCTTCTCCAAATGCAAAGAACCGCCGCAATCTTATAATTGCTATCACGGTGGTGGCCGCGGTTGTGGTTGCTTCAATGCTAGGACTTCTTTTCATCTCCGGCCGCCGCGGATGGCCCACGAAATCAAGCAAGAGGCTAAAATCAACACCCCATAAGAATCACTCAGCCTACTATAGTGCACAATCATCAGTTGATGTTAATGATAAGAAAGAAGAGAAGGGAGAGTTGAATTTTGTAGGGGAAGATAGAGGGAAAGCATTTGATTTGCAAGGGTTGCTTAGGGCTTCAGCTGAGGTACTTGGTAGTGGAAGTTTTGGTTGTACCTACAAAGCTATGGTTGTGAATAATAATAGTGGTAATGAAGAAGCAGTGGTTGTGAAAAGGTTTAGGCACATGAACAATGTTGGGAAACATGAGTTCTATGATCATATGAGAAGGCTTGGGAGTTTGTCACACCCTAATTTGCTCCCTCTTGTTGCATTCCACTATACAAGACAAGACAAGTTTTTGGTTTATGATTTTGGTCATAATCATAGCTTGGCTACTCATCTCCACGGTAGGAAAAATGGATGCATGCTAACTTGGCCAACTCGTTTAAAGATCATAAAAGGAGTGGCAAGGGGACTTGCATATCTCTACACACAATTTCCAAACCAAAAAGTCCCCCATGGCCATCTCAAATCCTCCAACGTCATCTTGGACGCGGCGTTCCAGCCGCGTCTAACGGAGTACGGCCTTGTCCCGGTGATGAACAAGAGCCATGCTCAGAAATTCATGGCAGCATATAAGTCTCCTGAGTCATCCGAGCGGACAACCGAGAAGACGGACGTGTGGTGTCTTGGCATCTTGATTCTAGAAGTGCTGACGGGGAAGTTCCCGGCGAACTATTTAAGGCATGGAGGGAAGGCTGAGAATAATGCTGACCTGGCAACTTGGGTGAACACGGTGGTGAGGGAAGAGTGGAGTGGAGAAGTGTTTGATGAGGGCATAATGGGAATTAAAAATGGTGAGGGTGAGATGTTGAAGCTTTTGAGGATTGGGATGTGTTGTTGTGAGTGGGATTTGGAGAGTAGGTGGGATTTGAAGGAGGCTTTGGCAAAGATTGAAGAGGTCAAGGACATTGGGGAAGATAATAATAATAATATTAATAATTCAAATTCTTATTCTTATGTTAGTGAAGGAGATTTGCATTCTAGGGCTACTACTTTCACTCAAGACGATTTCTCTTTCTCAATTATTGCTGCTACTTGA 1560 0.4321 MGLSGRIDVDTLFELSNLTSFSVIGNNFEGPMPEFKKIVWLRALFLSNNKFSGDIADDAFEGMKRLKKVYLEENELSGNINLCGKPMNKSCNADPNVTFDSPSPSPNAKNRRNLIIAITVVAAVVVASMLGLLFISGRRGWPTKSSKRLKSTPHKNHSAYYSAQSSVDVNDKKEEKGELNFVGEDRGKAFDLQGLLRASAEVLGSGSFGCTYKAMVVNNNSGNEEAVVVKRFRHMNNVGKHEFYDHMRRLGSLSHPNLLPLVAFHYTRQDKFLVYDFGHNHSLATHLHGRKNGCMLTWPTRLKIIKGVARGLAYLYTQFPNQKVPHGHLKSSNVILDAAFQPRLTEYGLVPVMNKSHAQKFMAAYKSPESSERTTEKTDVWCLGILILEVLTGKFPANYLRHGGKAENNADLATWVNTVVREEWSGEVFDEGIMGIKNGEGEMLKLLRIGMCCCEWDLESRWDLKEALAKIEEVKDIGEDNNNNINNSNSYSYVSEGDLHSRATTFTQDDFSFSIIAAT* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3015 519 SUPERFAMILY L domain-like 8 85 - -
Ahy16g3015 519 Gene3D Ribonuclease Inhibitor 1 93 IPR032675 -
Ahy16g3015 519 Gene3D Transferase(Phosphotransferase) domain 1 279 498 - -
Ahy16g3015 519 SUPERFAMILY Protein kinase-like (PK-like) 201 472 IPR011009 -
Ahy16g3015 519 PANTHER LRR RECEPTOR-LIKE KINASE 1 80 - -
Ahy16g3015 519 PANTHER LRR RECEPTOR-LIKE KINASE 77 481 - -
Ahy16g3015 519 ProSitePatterns Protein kinases ATP-binding region signature. 203 230 IPR017441 GO:0005524
Ahy16g3015 519 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 1 80 - -
Ahy16g3015 519 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 77 481 - -
Ahy16g3015 519 Pfam Protein kinase domain 200 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3015 519 Gene3D Phosphorylase Kinase; domain 1 165 277 - -
Ahy16g3015 519 ProSiteProfiles Protein kinase domain profile. 197 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3015 Ahy-Chr16 145252404 145254976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3015 1 513 Receptor kinase-like Gene Family AT4G31250 39.835 1.24e-128 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ahy16g3015 Pkinase 1.00E-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3015 - - ahf:112754157 1028.08