Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3010 ATGTCCATGGATCCAAGGAAATCAAACAAGATCAGAGAAATCGTTAGGCTTCAACAGATCCTCAAGAAATGGAGAAGGATAGCAAGCAATAACACCAACAACAACAACAACCACGACGACCACCGGAGCACCACCGCCAACACCGGCACTACTACGAGCAAAAGTATAAAGTTTCTAAAGAGAACGCTCTCGCTATCGGAACGTGACGTGGCGCAGACCGCGAATAACAACACGGTGGTTCCGAAAGGTTACTTAGCCATTTGTGTTGGTGAAGAGCTTAAACGGTTCGTAATTCCAACCGTTTATTTGGGGCACCAAGCCTTCCAGATTCTTCTGAGAGAAGCAGAGGAAGAATTTGGGTTCCAACAAACCGGTGTTCTTAGGATCCCTTGTGAAGTCTCGGTTTTTGAGAGTATATTGAAAATGGTTGAAGGAAAGAATAATGGTAGAAATAATAATCAGAAGGAAAAGGTTTCAACTACTACTGCAAATCAAGAGTGCAGGCTTAATGCTGAAGAGATTATGAGCTGTTGTTCTTCTTCCTCTGATAATCAACTTGCTTATTCTCACCATCCTCAAAGTCCTTTGTGCAGATAG 597 0.4305 MSMDPRKSNKIREIVRLQQILKKWRRIASNNTNNNNNHDDHRSTTANTGTTTSKSIKFLKRTLSLSERDVAQTANNNTVVPKGYLAICVGEELKRFVIPTVYLGHQAFQILLREAEEEFGFQQTGVLRIPCEVSVFESILKMVEGKNNGRNNNQKEKVSTTTANQECRLNAEEIMSCCSSSSDNQLAYSHHPQSPLCR* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3010 198 Pfam Auxin responsive protein 29 143 IPR003676 GO:0009733
Ahy16g3010 198 PANTHER SAUR FAMILY PROTEIN 7 198 - -
Ahy16g3010 198 MobiDBLite consensus disorder prediction 29 53 - -
Ahy16g3010 198 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 198 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3010 Ahy-Chr16 145173731 145174555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3010 3 198 Calmodulin-binding Proteins AT2G24400 56.061 1.83e-60 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3010 K14488 - adu:107495158 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2317 20 126671297 126672569 Ahy16g3010 16 145173731 145174555 PCT
Ahy10g1848 10 102825975 102827436 Ahy16g3010 16 145173731 145174555 PCT