Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3005 ATGGACCCCAAATCTTGCGGCGTTATGTCAGCACCGTCGTTATTAGCCGGCGACTACTGTGACTTCCGCCGTGCTCCGACGGAGCTCGATCTGGAAGTCGAAGAATTCATGAAGACTTGGATGGCGGACGCACCGAACGAGGAACACGCCGACGACAACGACTTGAAACCTTGTATGACGGATCCGTTCATCGGCAGCGGCGGCGGTGACGGTGGCGTTCCCTCCGCCTCCGCCTCCGCCGCTTTCCGAAACCCGGATGTGGTGGTGACTACATTTTCGACCTGTACTAGTGGAGTGACAGATAATAATAACAATATTAATTATAATAACAGTACTCAACAGCAGCAGCAGCTTGTGTGCTCTCAGAACCTCACTCGCAACCATTCAACTATTGATTCTCAATCATCCATTTGTGTTGGAAGCCCAGTGTCTGCTAATAAACCAAACGGCGGCAGAGGAAGTGAAGGCAAAGGAGGGACCACGTGCGGTTCCTCATCACGTGAGGCGTCCGATGAGGATGATGAGGCAGGTCCATGTGAAGAAAGCACAAACCCTATTGATATGAAGCGCCTCAGAAGGAAGGTTTCTAATCGCGAGTCTGCTCGGAGGTCTAGAAGAAGGAAGCAAGCTTATTTGACTGACCTTGAGTCTCAGGTTGAACAGCTGAGGTTGGAAAATGCAACCCTGTACAAACAGCTTACAGATGCTAGCCAACACTTTCGTGATGCTGATACAAATAACCGAGTTCTTAAATCAGATGTTGAAGCTTTGAGAGCTAAGGTGAAATTAGCGGAGGACATGGTTGCTCGAAGCTCTTTCACTAATCTGAACAACCAGCTAATCCAGAATCAGCGGGGTCAGATGAACACCAACAATAATTTGCGGCGCGTGGCACATGTTTCGCCAACCATTACTGTCCATGGAAATGACTCCTCATATGGAAGCTGCATCACTAGTGTTGATGGACAAAACTCAGCCCATCTTGGAGGACTTGCCAGAAACTTGGACATAACTAATAATAATAATAATAATAACAACTATAGTGATTATAATGCAGTCATAAGCGATGCTGTAAGCTCTGTCACTAACTTATGGCCGTGA 1101 0.4768 MDPKSCGVMSAPSLLAGDYCDFRRAPTELDLEVEEFMKTWMADAPNEEHADDNDLKPCMTDPFIGSGGGDGGVPSASASAAFRNPDVVVTTFSTCTSGVTDNNNNINYNNSTQQQQQLVCSQNLTRNHSTIDSQSSICVGSPVSANKPNGGRGSEGKGGTTCGSSSREASDEDDEAGPCEESTNPIDMKRLRRKVSNRESARRSRRRKQAYLTDLESQVEQLRLENATLYKQLTDASQHFRDADTNNRVLKSDVEALRAKVKLAEDMVARSSFTNLNNQLIQNQRGQMNTNNNLRRVAHVSPTITVHGNDSSYGSCITSVDGQNSAHLGGLARNLDITNNNNNNNNYSDYNAVISDAVSSVTNLWP* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3005 366 MobiDBLite consensus disorder prediction 131 209 - -
Ahy16g3005 366 CDD bZIP_plant_GBF1 190 241 IPR045314 GO:0003700|GO:0006355
Ahy16g3005 366 Pfam bZIP transcription factor 188 235 IPR004827 GO:0003700|GO:0006355
Ahy16g3005 366 PANTHER BASIC LEUCINE ZIPPER 63 30 366 - -
Ahy16g3005 366 Coils Coil 205 232 - -
Ahy16g3005 366 Gene3D - 188 243 - -
Ahy16g3005 366 PANTHER BASIC LEUCINE ZIPPER 9 30 366 - -
Ahy16g3005 366 Coils Coil 247 267 - -
Ahy16g3005 366 SMART brlzneu 185 249 IPR004827 GO:0003700|GO:0006355
Ahy16g3005 366 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 187 250 IPR004827 GO:0003700|GO:0006355
Ahy16g3005 366 SUPERFAMILY Leucine zipper domain 189 238 IPR046347 GO:0003700|GO:0006355
Ahy16g3005 366 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 192 207 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3005 Ahy-Chr16 145092702 145098993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3005 106 366 bZIP Transcription Factor Family AT5G24800 46.125 7.32e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy16g3005 bZIP_1 6.50E-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3005 K25784 - gmx:100776831 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2313 20 126455076 126459648 Ahy16g3005 16 145092702 145098993 PCT
Ahy10g1843 10 102712972 102718683 Ahy16g3005 16 145092702 145098993 PCT