Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2981 ATGAATGCTTCCATTTCGGAGCTTGAAAGCACCTCAAACTCGTTATCATTTTCTTTCTCAGCATCACCGCCGCCGCTACTGCCGCCGCCACCACTAAAACAATCGTCTTCAACGAAATTAAAGGGCAAAACGTACTCAAACAACAAGCACCCGGTGTACCGAGGGGTACGGATGCGGAACTGGGGGAAATGGGTGTCGGAAATCCGGGAGCCGCGCAAGAAATCGCGCATATGGCTGGGCACATTTCCGACACCGGAGATGGCGGCCAGGGCTCACGACGTGGCCGCACTAAGCATCAAAGGAAATTCCGCCATTCTCAATTTTCCTGACCTTGAAAACTGCCTTCCTCGCCCGGCATCCTTGGCGCCTCGCGACGTCCAGGCTGCCGCGGCGAAGGCAGCTCACATGGACAAGTTTGAGTTATTAATACCTTCTTCGTCCCCGTCCTCGTCCTCGTTGACTTTCGAGCTGACGGAGATTATTGAGCTTCCGAGGCTCGAAACCGGGGACGAGTACCGGAAGGAGTTTGTGTTTGTGGACTCCGAGGATGCATGGATGTATCAGCCACCTCCAATGCCGTGGTTGCTGTACGGACAAGAAGAAGAAGAAGATGGTACTTCTTTCCGGAGTTTTCTTTCGGATTACTAA 648 0.5309 MNASISELESTSNSLSFSFSASPPPLLPPPPLKQSSSTKLKGKTYSNNKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPDLENCLPRPASLAPRDVQAAAAKAAHMDKFELLIPSSSPSSSSLTFELTEIIELPRLETGDEYRKEFVFVDSEDAWMYQPPPMPWLLYGQEEEEDGTSFRSFLSDY* 216
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2981 215 ProSiteProfiles AP2/ERF domain profile. 52 109 IPR001471 GO:0003700|GO:0006355
Ahy16g2981 215 MobiDBLite consensus disorder prediction 15 49 - -
Ahy16g2981 215 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 10 200 - -
Ahy16g2981 215 PRINTS Ethylene responsive element binding protein signature 75 91 IPR001471 GO:0003700|GO:0006355
Ahy16g2981 215 PRINTS Ethylene responsive element binding protein signature 53 64 IPR001471 GO:0003700|GO:0006355
Ahy16g2981 215 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 10 200 - -
Ahy16g2981 215 SMART rav1_2 52 115 IPR001471 GO:0003700|GO:0006355
Ahy16g2981 215 Pfam AP2 domain 51 101 IPR001471 GO:0003700|GO:0006355
Ahy16g2981 215 Gene3D AP2/ERF domain 52 110 IPR036955 GO:0003700|GO:0006355
Ahy16g2981 215 SUPERFAMILY DNA-binding domain 52 110 IPR016177 GO:0003677
Ahy16g2981 215 CDD AP2 53 111 IPR001471 GO:0003700|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ahy16g2981 Ahy-Chr16 144656546 144657620 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2981 33 204 AP2-EREBP Transcription Factor Family AT5G11590 53.807 2.35e-57 179
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy16g2981 AP2 2.20E-14 CL0081
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2981 K09286 - gmx:100794316 223.402
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2209 20 122945988 122947088 Ahy16g2981 16 144656546 144657620 PCT
Ahy10g1771 10 99936968 99938165 Ahy16g2981 16 144656546 144657620 PCT