Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy16g2981 | ATGAATGCTTCCATTTCGGAGCTTGAAAGCACCTCAAACTCGTTATCATTTTCTTTCTCAGCATCACCGCCGCCGCTACTGCCGCCGCCACCACTAAAACAATCGTCTTCAACGAAATTAAAGGGCAAAACGTACTCAAACAACAAGCACCCGGTGTACCGAGGGGTACGGATGCGGAACTGGGGGAAATGGGTGTCGGAAATCCGGGAGCCGCGCAAGAAATCGCGCATATGGCTGGGCACATTTCCGACACCGGAGATGGCGGCCAGGGCTCACGACGTGGCCGCACTAAGCATCAAAGGAAATTCCGCCATTCTCAATTTTCCTGACCTTGAAAACTGCCTTCCTCGCCCGGCATCCTTGGCGCCTCGCGACGTCCAGGCTGCCGCGGCGAAGGCAGCTCACATGGACAAGTTTGAGTTATTAATACCTTCTTCGTCCCCGTCCTCGTCCTCGTTGACTTTCGAGCTGACGGAGATTATTGAGCTTCCGAGGCTCGAAACCGGGGACGAGTACCGGAAGGAGTTTGTGTTTGTGGACTCCGAGGATGCATGGATGTATCAGCCACCTCCAATGCCGTGGTTGCTGTACGGACAAGAAGAAGAAGAAGATGGTACTTCTTTCCGGAGTTTTCTTTCGGATTACTAA | 648 | 0.5309 | MNASISELESTSNSLSFSFSASPPPLLPPPPLKQSSSTKLKGKTYSNNKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPDLENCLPRPASLAPRDVQAAAAKAAHMDKFELLIPSSSPSSSSLTFELTEIIELPRLETGDEYRKEFVFVDSEDAWMYQPPPMPWLLYGQEEEEDGTSFRSFLSDY* | 216 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy16g2981 | 215 | ProSiteProfiles | AP2/ERF domain profile. | 52 | 109 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy16g2981 | 215 | MobiDBLite | consensus disorder prediction | 15 | 49 | - | - | |
Ahy16g2981 | 215 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 10 | 200 | - | - | |
Ahy16g2981 | 215 | PRINTS | Ethylene responsive element binding protein signature | 75 | 91 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy16g2981 | 215 | PRINTS | Ethylene responsive element binding protein signature | 53 | 64 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy16g2981 | 215 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE | 10 | 200 | - | - | |
Ahy16g2981 | 215 | SMART | rav1_2 | 52 | 115 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy16g2981 | 215 | Pfam | AP2 domain | 51 | 101 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy16g2981 | 215 | Gene3D | AP2/ERF domain | 52 | 110 | IPR036955 | GO:0003700|GO:0006355 | |
Ahy16g2981 | 215 | SUPERFAMILY | DNA-binding domain | 52 | 110 | IPR016177 | GO:0003677 | |
Ahy16g2981 | 215 | CDD | AP2 | 53 | 111 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy16g2981 | Ahy-Chr16 | 144656546 | 144657620 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy16g2981 | 33 | 204 | AP2-EREBP Transcription Factor Family | AT5G11590 | 53.807 | 2.35e-57 | 179 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Ahy16g2981 | AP2 | 2.20E-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy16g2981 | K09286 | - | gmx:100794316 | 223.402 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy20g2209 | 20 | 122945988 | 122947088 | Ahy16g2981 | 16 | 144656546 | 144657620 | PCT | |
Ahy10g1771 | 10 | 99936968 | 99938165 | Ahy16g2981 | 16 | 144656546 | 144657620 | PCT |