Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2978 ATGGAGAGAGTTATCGGAGGGAAGTACAAAATTGGTCAGAAAATTGCAAGTGGCTCATTTGGTGAAATTCATATAGGGTCACATATTGAGAATGCTGAAACTGTTGCAATTAAGATGGAGAATAGGAAAACCAAACAACCACAGCTACTTTATGAAGCTGAGCTATATAATCTTCTAAAAGGAGGAAGTGGTATTCCAAGAGTGAAATGGAGTGGCACTGATAAAGACAACAATGTTCTAGTTCTTGACCTTTTAGGACCAAGTCTTGAAGACCTTTTTTACTATTGTGGAAAGAAATTTTCATTAAAAACCGTTTTGATGTTGGCTGATCAAATGCTTACAAGGATAGAGTATTTGCATTCCAAGGGCTTTTTGCATAGAGACATTAAGCCAGATAACTTCCTTATGGGTCTTGGCAGAAAAGCAAAACAGGTTTATATGATTGATTTTGGACTTGCAAAGAGATACAGAGACCCTATCACAAATAAGCATATACCTTGTAGGGAAAACAAACTTTTAATAGGGACTCCCCGTTATGCTAGTCGCAATACTCATTCGGGATTTGAACAAAGTCGCCGGGATGATTTGGAGTCTCTTGGTTATGTTCTTATGTACTTTATAAGAGGAAGCCTTCCTTGGCAAGGTCTACAAGCTCCAACAAATAAACAAAAATACGACAAAATTTGTGAAATGAAGAAATCAATTCCAATTGATATACTTTGCAAGTCATGTCCTGTGCAGTTCGCATCATACTTTCGGTATTGCCATGCTTTGACATTTGATCAACGACCAGATTATGGATTCTTGAAGCGCATGTTTCGTGATTTATTCAATGCTCAAGGATATGATGATTTATTTGACTGGACCATTCTAAAATATCAGCAAATGCGGCAGACAAAGACGTTAATTGAATCAAACCCTCCAATAATTGCTGTTCGTAGCAATCTACAACCAAAGGATGGTGACAACCAACAAGGAGTTAGTGATGTTACTGAAGATATTGTGGCAAAACCATCGGTTAATACTGATCATCCTCATGTTATCATAAACAGCAAGAAATCTAATGTTCAGAAATTTAACGCCAAGACAGAGAAGAATAATGATTTATCTATTTCCAGCAGTATGCCCAGAGTGTTGATAGAAAATGTTTCAAAACTTAGAATTCCAGCAGAAGCCTCAAATCAGGGTTGTGTATCTGCCAATAATAACTATGGTAACCCAAGAACTTCTGTACCTACGTTACGTAGAACTTTTTCAACAAATTAA 1266 0.3681 MERVIGGKYKIGQKIASGSFGEIHIGSHIENAETVAIKMENRKTKQPQLLYEAELYNLLKGGSGIPRVKWSGTDKDNNVLVLDLLGPSLEDLFYYCGKKFSLKTVLMLADQMLTRIEYLHSKGFLHRDIKPDNFLMGLGRKAKQVYMIDFGLAKRYRDPITNKHIPCRENKLLIGTPRYASRNTHSGFEQSRRDDLESLGYVLMYFIRGSLPWQGLQAPTNKQKYDKICEMKKSIPIDILCKSCPVQFASYFRYCHALTFDQRPDYGFLKRMFRDLFNAQGYDDLFDWTILKYQQMRQTKTLIESNPPIIAVRSNLQPKDGDNQQGVSDVTEDIVAKPSVNTDHPHVIINSKKSNVQKFNAKTEKNNDLSISSSMPRVLIENVSKLRIPAEASNQGCVSANNNYGNPRTSVPTLRRTFSTN* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2978 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Ahy16g2978 421 Gene3D Transferase(Phosphotransferase) domain 1 1 344 - -
Ahy16g2978 421 Pfam Protein kinase domain 9 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g2978 421 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g2978 421 MobiDBLite consensus disorder prediction 399 421 - -
Ahy16g2978 421 SUPERFAMILY Protein kinase-like (PK-like) 5 282 IPR011009 -
Ahy16g2978 421 PANTHER CASEIN KINASE-RELATED 1 400 - -
Ahy16g2978 421 SMART serkin_6 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g2978 421 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2978 Ahy-Chr16 144584634 144592255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2978 7 249 CBL-interacting serine-threonine protein kinases AT4G24400 26.400 3.67e-15 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Ahy16g2978 Pkinase 8.90E-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2978 K08960 - gmx:100782913 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2234 20 123847935 123852745 Ahy16g2978 16 144584634 144592255 PCT
Ahy10g1787 10 100625105 100629833 Ahy16g2978 16 144584634 144592255 PCT