Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2937 ATGGATAGCTTCAGTGAAGATGAAGAATGTCCATTCTTCGATGCAATATCAGATGGTACTGACACCCCTGAAGCTAATTCAAGTCCTAATAAGGATGTGGTCTTCAATGACTTTGGGTATCAAGTTTGGATTCGGAGTCCCCCTAGTGTTCATGAGCGTAGGATTAATTTTATGAAGTGGATGGGACTCAATAAGGATCAAGTTACTCTCGAGAATTCGGTAGATGTTGATGGTATGGAAGGGGATATAGATATGATGGAAGATAGTAGTCCGAGTGTAACAACATGTTCTTGTTTCAAGGAGGAGTTTTGTTCGAATCGGCCTTCGGTATCTTGTTTGTCAAGGATGGATTCTTCAGAGGAGTTTAATTTGGTGGAGAACATGCCGTGCCGAGATGGGAAATTGGAGAGTGGAGTGAGGTGGAATCTGGATCCGGTGGGGCTATACAGGGAGAGGAATGATGGTGGAAGAAATGCAGGCTCGGATCAGCGAGATGTAGCCGAGGAATGCGAAGATTCTGAGTACTTCTTTTGTGTTTCTAAGAATTTCCAGCATGGGAAGATATGTAAGGAGTCTAAGGACATAGATGCCTTGAAGCAGAGGTCCAAGAGGAACAATAAGGGTTGGTTCAAAAGATTTGGTTCAATGAGTTGCATGGTTGATAGGCAAGGGGAATCTGATAGCAGAAGACACGATGGCGGATGTGTGTTCTCAGGGTCAAATAGGATTCAGAAGGTTAAGGTCCGGCAATGCCGGAAGCAAACAAAGGAACTTTCAGCTCTTTACATGGGCCAAGATATTCAAGCACATAGAGGCTCAATCTTGACCATGAAATTCAGCCCTGACGGCCGGTTTCTTGCCAGTGCCGGCGAAGATGGCATTGTGAGATTGTGGAAAGTGGTTGAGGACGAGACATGTAATGAAGTTGACATTCCAGAAGTTGATCCATCCTGCATTTACTTTACAGTGAATAATCTTTCTGAATTAACACCCTTATTTCTGGAAAAGGAGAAATTGAGCAAAGTGAAAGGCCTGAATAAAACATCTGATTCGGCTTGCATTATTTTCCCTCCCAAGGTCTTTCGGCTGTTGGAGAAACCATTGCATGAGTTCCATGGTCATGAAGGTGAAATTCTGGATCTCTCTTGGTCAAACAATAATTGTCTGCTGTCATCTTCAGTTGACAAAACTGTCCGTCTATGGCAAGTGGGACACGACTTCTGCTTGAAAGTTTTTCCACATAGTAACTATGTGACATGCATACAATTCAATCCTGTGGATGATAATTATTTCATCAGTGGATCTATCGATGGAAAAGTTCGCATCTGGGAAGTTCCTGATTGTCATGTTGTTGATTGGACTGATATCCGGGAAATTGTGACTGCAGTTTGTTATCGGCCGAATGGTCAGGGAGGGATTATTGGGTCCATGACAGGCAATTGCCGGTTTTACACTCTATCAGAGAATCACTTACAGTTAGATTCCCAGTTATGCTTGCTTGGTAAAAAGAAACTTCCTTGCAGAGGAATAACTGGTTTTCAGTTTCTTCCACAAGATTCTAACAAAGTTATGGTTACTTGTGCTGATTCAAAAGTCAGAATCCTTGATGGGCTTAATGTGGTTAGTAAATACGAAGGCCTTAGTGCAGCGGGACAAATGTCTGCGTCTGTTACTTCGGATGGGAAGCATATTTTGTCGGCATGCGAAGACTCTAATGTATATCTGTGGAATGTTTCTGACAATGAGTCTAGCTCCACGAAAGCGAAGAAGATTAAGTCCTGCGAGCGATTCTTTTCGAATGCATCGGTCGCAGTACCTTGGTGTGGTTTTGAAAGTGCTCGCCAATTAGATTTCTTCGCCAAGGGGTCACCACAAGCAATGTGTCTCAACCCTGCCGCTTCATTTTCTCTAAGTCGAGATATCTCCTCGGAGTCTCTTCCCAAGGGATCTGCAACTTGGCCTGAGGAGAAGCTTCCTATTTCAAGCCCCAAGGCTAAAATATCATCAATGCATAAATCCGCATACAAGTTCTTGAAATCTTCTTGCAAGTGCACATCCAATTGTCACGCATGGGGTCTGGTTATTTTGACAGCCGGCTGGGATGGCCGGATAAAATCGTTCCACAATTACGGGCTGCCAGTACTAGTTTAA 2151 0.4356 MDSFSEDEECPFFDAISDGTDTPEANSSPNKDVVFNDFGYQVWIRSPPSVHERRINFMKWMGLNKDQVTLENSVDVDGMEGDIDMMEDSSPSVTTCSCFKEEFCSNRPSVSCLSRMDSSEEFNLVENMPCRDGKLESGVRWNLDPVGLYRERNDGGRNAGSDQRDVAEECEDSEYFFCVSKNFQHGKICKESKDIDALKQRSKRNNKGWFKRFGSMSCMVDRQGESDSRRHDGGCVFSGSNRIQKVKVRQCRKQTKELSALYMGQDIQAHRGSILTMKFSPDGRFLASAGEDGIVRLWKVVEDETCNEVDIPEVDPSCIYFTVNNLSELTPLFLEKEKLSKVKGLNKTSDSACIIFPPKVFRLLEKPLHEFHGHEGEILDLSWSNNNCLLSSSVDKTVRLWQVGHDFCLKVFPHSNYVTCIQFNPVDDNYFISGSIDGKVRIWEVPDCHVVDWTDIREIVTAVCYRPNGQGGIIGSMTGNCRFYTLSENHLQLDSQLCLLGKKKLPCRGITGFQFLPQDSNKVMVTCADSKVRILDGLNVVSKYEGLSAAGQMSASVTSDGKHILSACEDSNVYLWNVSDNESSSTKAKKIKSCERFFSNASVAVPWCGFESARQLDFFAKGSPQAMCLNPAASFSLSRDISSESLPKGSATWPEEKLPISSPKAKISSMHKSAYKFLKSSCKCTSNCHAWGLVILTAGWDGRIKSFHNYGLPVLV* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2937 716 MobiDBLite consensus disorder prediction 1 30 - -
Ahy16g2937 716 Gene3D - 500 629 IPR015943 GO:0005515
Ahy16g2937 716 SMART WD40_4 260 299 IPR001680 GO:0005515
Ahy16g2937 716 SMART WD40_4 446 485 IPR001680 GO:0005515
Ahy16g2937 716 SMART WD40_4 496 536 IPR001680 GO:0005515
Ahy16g2937 716 SMART WD40_4 537 577 IPR001680 GO:0005515
Ahy16g2937 716 SMART WD40_4 405 444 IPR001680 GO:0005515
Ahy16g2937 716 SMART WD40_4 364 402 IPR001680 GO:0005515
Ahy16g2937 716 ProSiteProfiles Trp-Asp (WD) repeats profile. 411 445 IPR001680 GO:0005515
Ahy16g2937 716 SUPERFAMILY WD40 repeat-like 266 706 IPR036322 GO:0005515
Ahy16g2937 716 Pfam WD domain, G-beta repeat 268 299 IPR001680 GO:0005515
Ahy16g2937 716 Pfam WD domain, G-beta repeat 408 443 IPR001680 GO:0005515
Ahy16g2937 716 Pfam WD domain, G-beta repeat 366 401 IPR001680 GO:0005515
Ahy16g2937 716 Gene3D - 220 499 IPR015943 GO:0005515
Ahy16g2937 716 PRINTS G protein beta WD-40 repeat signature 286 300 IPR020472 -
Ahy16g2937 716 PRINTS G protein beta WD-40 repeat signature 389 403 IPR020472 -
Ahy16g2937 716 PRINTS G protein beta WD-40 repeat signature 431 445 IPR020472 -
Ahy16g2937 716 ProSiteProfiles Trp-Asp (WD) repeats profile. 371 403 IPR001680 GO:0005515
Ahy16g2937 716 ProSiteProfiles Trp-Asp (WD) repeats profile. 267 308 IPR001680 GO:0005515
Ahy16g2937 716 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 6 715 - -
Ahy16g2937 716 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 411 445 - -
Ahy16g2937 716 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 371 403 - -
Ahy16g2937 716 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 267 300 - -
Ahy16g2937 716 PANTHER WD REPEAT DOMAIN 44 6 715 IPR040324 -
Ahy16g2937 716 ProSiteProfiles Trp-Asp (WD) repeats profile. 554 586 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2937 Ahy-Chr16 143923753 143928773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2937 265 459 Miscellaneous Gene Families AT5G08390 23.000 2.69e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2937 - - mtr:MTR_1g007740 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2558 17 121157028 121161745 Ahy16g2937 16 143923753 143928773 ECH
Ahy13g2650 13 93543791 93547555 Ahy16g2937 16 143923753 143928773 ECH
Ahy16g2937 16 143923753 143928773 Ahy16g2937 16 143923753 143928773 ECH