Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2897 ATGGCGACACCGCCACCGATGGGGCCACCGGGAAATCCAGTGTTTGACGGAGGACCGCCACCACCGCCGCCAACTCCAGGGACGGACATGACTGGAATATGCTTCAGAGACCAGCTTTGGCTAAACACCTACCCATTGGATCGGAACCTGGTGTTTGATTACTTTGCTTTGTCCCCCTTTTATGATTGGGGCTGCAACAATGAGCAGCTTCGAATGCGTTCTGTCCACCCCCTCGATATCTCACAACTATCGAAGATGACAGGGATAGAGTATATGCTCAGTGAAGTTTTGGAACCCCACCTTTTTGTAATTCGCAAACAAAAGAGAGATAGCCCTGAGAAAGTTACACCGATGCTGGCATACTACATCTTGGATGGTTCAATTTACCAGGCACCACAACTATGCAATGTTTTTGCTGCTCGAATTGGAAGGGCACTCTATTATATACAGAAAGCCTTTACTACAGCTGCCTCAAAGCTGGAGAAGATAGGACATGTTGATTCTGAAAATGAGACTGTGGTAACGGAATCAAAGGTTGCTAAGGAGACAATTGACTTGAAGGAAGTTAGGCGCGTGGATCAAATTCTTGCATCCCTGCAGCGCAAGCTACCGCCTGCCCCACCACCACCACCATTTCCAGAAGGATATGCTCCTACTGCAGCAGGAGAAACTGATAAAGGCCCCGAAGCTCAAGAAGGAGCAGAGTTGCAGGTTCCTCCTGGCGATCCCATTGTTGATCAAGGACCTGCAAAAAGAATGAAATTGATGTAA 771 0.4825 MATPPPMGPPGNPVFDGGPPPPPPTPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWGCNNEQLRMRSVHPLDISQLSKMTGIEYMLSEVLEPHLFVIRKQKRDSPEKVTPMLAYYILDGSIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGHVDSENETVVTESKVAKETIDLKEVRRVDQILASLQRKLPPAPPPPPFPEGYAPTAAGETDKGPEAQEGAELQVPPGDPIVDQGPAKRMKLM* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2897 256 MobiDBLite consensus disorder prediction 200 256 - -
Ahy16g2897 256 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 6 15 254 - -
Ahy16g2897 256 PANTHER MED-6-RELATED 15 254 IPR007018 GO:0003712|GO:0006357|GO:0016592
Ahy16g2897 256 PIRSF MED6_meta/plant 19 255 IPR016820 GO:0003712|GO:0006357|GO:0016592
Ahy16g2897 256 MobiDBLite consensus disorder prediction 202 216 - -
Ahy16g2897 256 Gene3D Mediator complex, subunit Med6 27 156 IPR038566 -
Ahy16g2897 256 MobiDBLite consensus disorder prediction 1 28 - -
Ahy16g2897 256 Pfam MED6 mediator sub complex component 33 158 IPR007018 GO:0003712|GO:0006357|GO:0016592
Ahy16g2897 256 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2897 Ahy-Chr16 143235931 143239250 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Ahy16g2897 Med6 3.50E-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2897 K15128 - gmx:100792248 395.201