Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2872 ATGTTGGCCTTTAATTTTGTGGCAACATTGGGTGACACATATGACCAAATTTTGATCAAGTTCAAAAGCTCCTTGTCCAATTCCGACATTGCTTTGAGTAATTGGGGCACGGAGCCAAATCTTTGTAAATGGAATGGTTTATTGTGTGACAAGAAAACACAATCATTTCATGGCTTGAGACTAGAGAATATGGGACTAAGTGGGAGAATTGATGTTGACACATTATTTGAGTTATCAAATTTGACAAGCTTCAGTGTCATAGGAAATAACTTTGAGGGTCCAATGCCTGAATTCAAGAAGATTGTGTGGTTAAGAGCTTTGTTTCTTTCTAATAACAAATTCTCTGGTGACATTGCTAATGATGCTTTTGAAGGTATGAAAAGATTGAAGAAGGTGTACTTGGAAGAGAATGAGTTCAGTGGTTATATTCCAAAGTCCATTGCTGAATTGCCTAAGCTTTTGGAATTGAACTTAAGTGGTAACAGTTTTGAAGGACAAATACCAGAGTTTCATCAAAAGAATCTCAGCTTTAATGTGTTTGATTTATCAAACAACCTATTGGAGGGTATCATACCGCAAAGCTTAAGCAACCAAGATCCAATCCGGTTTGCTGGCAACATAAATCTATGTGGAAAGCCTATGAACAAGAGCTGCAATGCCGATCCTAACGTGACCTTTGACTCCCCTTCTCCTCTTTCTCCAAATGCAAAGAACCGCCGCAATCTTATAATTGCTATCACGGTGGTGGCCGCGGTTGTGGTTGCTTCAATGCTAGTACTTCTTTTCATCTCCGGCCGCCGCCGACGGCCTACGAAATCAAGCAAGAGGCTAAAATCAACACCCCATAAGAATGACTCAGCCTACTATAGTGCACAATCATCAATTGATGTTAATAATAAGAAAGAAGAGAAGGGAGAGTTGAATTTTGTTGGGGAAGATAGAGAGAAAGCATTTGATTTGCAAGGGTTGCTTAGGGCTTCAGCTGAGGTACTTGGTAGTGGAAGTTTTGGTTGTACCTACAAAGCTATGGTTGTGAATAATAATAGTGGTAATGAAGAAGCAGTGGTTGTGAAAAGGTTTAGGCACATGAACAATGTTGGGAAACATGAGTTCTATGATCATATGAGAAGGCTTGGGAGTTTGTCACACCCTAATTTGCTCCCTCTTGTTGCATTCCACTATACAAGACAAGACAAGTTTTTGGTTTATGATTTTGGTCATAATCATAGCTTGGCTACTCATCTCCACGGTAGGAAAAATGGATGCATGCTAAAGTGGCCAACTCGTTTAAAGATCATAAAAGGAGTGGCAAGGGGACTTGCATATCTCTACACACAATTTCCAAACCAAAAAGTCCCCCATGGCCATCTCAAATCCTCCAACGTCATCCTCGACGCGGCGTTCCAGCCGCGTCTAACGGAGTATGGCCTTGTTCCGGTGATGAACAAGAGCCATGCTCAGAAATTCATGGCAGCATATAAGTCTCCTGAGTCATCCGACCGGACAACCGAGAAGACGGACGTGTGGTGTCTTGGCATCTTGATTCTAGAAGTGCTGACGGGGAAGTTCCCGGCGAACTATTTAAGGCATGGAGGGAAGGGTGAGAATAATGCTGACCTGGCAAGTTGGGTGAACACGGTGGTGAGGGAAGAGTGGAGTGGAGAAGTGTTTGATGAGGGCATAATGGGAATAAAAAATGGTGAGAGTGAGATGTTGAAGCTTTTGAGAATTGGGATGTGTTGTTGTGAGTGGGATTTGGAGAGTAGGTGGGATTTGAAGGAGGCTTTGGCAAAGATTGAAGAGGTGAAGGAGATTGGGGATAATAATGATTGTGAAGATGATAATAATAATATTAATAGTTCAAATTCTTATTCTTATGTTAGTGAAGGAGATTTGCATTCTAGGGCTACTACTTTCACTCATGACGATTTCTCTTTCTCAATTATTGCTGCTACTTGA 1959 0.4145 MLAFNFVATLGDTYDQILIKFKSSLSNSDIALSNWGTEPNLCKWNGLLCDKKTQSFHGLRLENMGLSGRIDVDTLFELSNLTSFSVIGNNFEGPMPEFKKIVWLRALFLSNNKFSGDIANDAFEGMKRLKKVYLEENEFSGYIPKSIAELPKLLELNLSGNSFEGQIPEFHQKNLSFNVFDLSNNLLEGIIPQSLSNQDPIRFAGNINLCGKPMNKSCNADPNVTFDSPSPLSPNAKNRRNLIIAITVVAAVVVASMLVLLFISGRRRRPTKSSKRLKSTPHKNDSAYYSAQSSIDVNNKKEEKGELNFVGEDREKAFDLQGLLRASAEVLGSGSFGCTYKAMVVNNNSGNEEAVVVKRFRHMNNVGKHEFYDHMRRLGSLSHPNLLPLVAFHYTRQDKFLVYDFGHNHSLATHLHGRKNGCMLKWPTRLKIIKGVARGLAYLYTQFPNQKVPHGHLKSSNVILDAAFQPRLTEYGLVPVMNKSHAQKFMAAYKSPESSDRTTEKTDVWCLGILILEVLTGKFPANYLRHGGKGENNADLASWVNTVVREEWSGEVFDEGIMGIKNGESEMLKLLRIGMCCCEWDLESRWDLKEALAKIEEVKEIGDNNDCEDDNNNINSSNSYSYVSEGDLHSRATTFTHDDFSFSIIAAT* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2872 652 Pfam Leucine rich repeat N-terminal domain 16 50 IPR013210 -
Ahy16g2872 652 PANTHER LRR RECEPTOR-LIKE KINASE 11 609 - -
Ahy16g2872 652 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 609 - -
Ahy16g2872 652 Pfam Leucine rich repeat 104 162 IPR001611 GO:0005515
Ahy16g2872 652 MobiDBLite consensus disorder prediction 271 292 - -
Ahy16g2872 652 ProSitePatterns Protein kinases ATP-binding region signature. 331 358 IPR017441 GO:0005524
Ahy16g2872 652 ProSiteProfiles Protein kinase domain profile. 325 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g2872 652 SUPERFAMILY Protein kinase-like (PK-like) 329 600 IPR011009 -
Ahy16g2872 652 Gene3D Transferase(Phosphotransferase) domain 1 407 627 - -
Ahy16g2872 652 Gene3D Ribonuclease Inhibitor 11 99 IPR032675 -
Ahy16g2872 652 Gene3D Ribonuclease Inhibitor 100 220 IPR032675 -
Ahy16g2872 652 Gene3D Phosphorylase Kinase; domain 1 291 405 - -
Ahy16g2872 652 Pfam Protein kinase domain 329 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g2872 652 SUPERFAMILY L domain-like 35 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2872 Ahy-Chr16 142692722 142695735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2872 1 631 Receptor kinase-like Gene Family AT5G35390 44.885 2.85e-177 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ahy16g2872 Pkinase 1.20E-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2872 - - aip:107648455 1272.69