Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2848 ATGAATGGTGACCGGAAAATCCCTGTTTCTCCATCGAAGGAACAGATTGATGGTGCTCAGAAGATTAGAGCATTGCATGGGAGGACTACTGGTCCAACAAGGCGTTCTACAAAAGGGAATTGGACACCTGAACAGGATGAGATCTTGCGGAAGGCTGTTCAGCATTTCAAAGGAAAGAATTGGAAAAAAATAGCGGAGTGTTTCAAGGATAGAACTGATGTACAATGCCTACATAGGTGGCAGAAAGTCTTAAATCCTGAACTTGTCAAGGGCCCATGGTCTAAGGAGGAAGATGAAGTAATTATTGAATTGGTGAATAAATATGGACCTAAAAAATGGTCTACTATTGCTCATCATTTACCAGGACGCATTGGTAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTGGTATAAACAAGGAAGCATGGACACAGGAAGAGGAGTTGACCTTAATCCGTGCTCATCAAATTTATGGAAACAAATGGGCTGAATTAACGAAGTTCTTGCCTGGGAGGACAGATAATTCTATTAAGAACCATTGGCACAGTTCTGTCAAAAAGAAATTGGATTCTTACTTGGCATCAGGGTTGCTTGCTCAGTTTCAATCTGCACCACTTGCTGGAAATCCTGATCAACAGATGGTTTTAACTTCAGAGATGCACTCCGTTGGAGATGGTAATGGTCCTAAGAGGACTGATAGAGAGGATGTTTCAGAGTGTAGCCAAGAATCAGCTGATTCTGCTGGATTGACTAGTAATGTTGATCTACAAACTCGAGAGGTGTATAAGCCAGAGGAAGAATCTATTCTAGGAAAGGATCATAATCTGAGTCAAGCATCGTGTCCACAGCATTACTACATATCTCTTGATGATGTGGATATCTGCATCCCAGAAGTTGCTTGCCAAGATGCTTGCTGTTCTCAATTTGCTGAGCAGATATGCTCACACAAATCTGGAAATGCCCTAACTGGGGATTACCAGTTTAATTGTGTGGATAATAGTGAAATGTGTAACATGGTAAATGTTCCCTTTCAGACTGAGGGGTTAGGTATTTCAACTTTGATGAGACCTGCATCTATGGATCCTGCTAAGCCAAATAACATGTCAATATCTGAGGATGAATGTTGCAGATTCCTATTTTCGGAGGCAGTTAGTGATGGATGCTTTTCTCCCAGAGTTTATATTAAAGACATGGACATGGTTGATTTTTCTGGATGCAATATGTTTCTATGTCAATCATGTCATATACAGATACCTTCTCCTCGTGAATCATCTTCGACTTCACAGCTTACTTGTCCAAAGTGTTCTAACAACTTTAAAGGAAGTTCATCTTCTCAATCTTTCCCACCAGTATTTTCTGCTAGTGTTTCTAGATTCGTTTATGCTGCTGAAGACAACAAGTTATTAGGGAAAGAGGATCATCAAATTGTCTCTGGTGGACCTGATAATGTCATTTCTTCTAATGGCACATCCAGTTCTCCTTGTGTTGACAATATAGATAGTGAAGTAAAGCAAGAGCAACCAGAAACTCCGAAGGATTCTTCAAAATTGGTCCCTGTAAATAGTTTTGGTTATGGATCAAATTCTAAGGTAACTTGTTATGCAAAATATGGGAAGTTGAATGAGCATTCAAAAAAGGAAGATACAGGAACTTTATGCTACCAACCGCCCTGTTTTCCAAGCTTGGATATTCCTTTTCTAAGCTGTGATCTTGCACAATCTGAGCCTGATATGCAGCAAGAATTTAGTCCCCTTGGTATCCGCCAGCTTCTGATGTCTCCTGTAACCTGTCTAACTCCTTTCAGGTTGTGGGACTCACCCTCTGGTGGTGATAATCTAGATGCCTTGTTTAAAAGTGCAGCCAAAACTTTTACTGGTACACCATCCATATTAAGTAAACGACACCGAGATTTGTTATCACCACTTTCAGATAAAAGAACTGACAAGAAACTTGTGACAGACATGCCATCCAGCTTGATAAAAAGCTTTTCCAGCTTGGACTTTATGTTTGATGACAATGAGAATCGGGAGGCAGATATGATTTCTCCGACTTCATTACAAAAATGGAGCATTGCTGTGTCTGTTGATGATGATAAAGAAAATTGTGGTCAAACTGTTAAAGATAAACAAGTAGAAGAGAAAAATAATTCTGCCATTTCGGATGAAAAGAACAGAGAAAATGGGACTGTCAAAAATAGCTCTCAGGATAGCCTTAAGCATCAAGTTGATTCAAAGATGAAGAAGATTGATATTGACACTGATAATGATGATGATAATGATAATGATAATGTTGAACAGCCTTCTGGAATTTTGGTTGAACGTAATATGAATGATATAGCACCAAATTCTCCTGGATCAGACACAGTTCTAGGTTCAAGTGCTCGAACTCCCAAGAACTTGAGCAATAGGAGGTTGGAAGCAATTCCGAATCAGCGCAGTCCATGCTCAAGGGTCAAGTGTGTCCGGGCAAAGGAGCATGAAAAGCTTTCAGTTGATGTCACTTGTGTAGGGACGACTTCAGGGAAACAAGCCAAAAATGATGGTGGTTTTGAAACAAGTAGCATATTTGGTGACACACCTTTTATGAAAAGCATTAAATCACCTTCTGCATGGAAATCTCCATGGTTCATCAACGCAACATTTCTGTGCAGCCCCAGGATTGCTACTGAAATTTCAATTGAGGATTATGGGTACTTAATGAGCTCAGGCAATAGAAGCTATGACGCCATCGGTCTGATGAAACAGATCAGTGAAAAAACTGCTGCTACATATGCTAATGCTCAAGAAGTTTTGGAAAATGAAACTCCTGAAGCATTGCCTAAAAATGCATCTTTAAATGACGAAGAAGGTGGTCAGGATGATAATCATCTGCAGAAACAGTCTGCTAAGCATTCTCAGGCAGCTTCAAATGCATTGATGGAACGACGCATACTTGACTTTAGTGAATGTGAAACAACACCAAGCAAAGGTGATAACAGCAAATCCTCACCTGTGAACTTCTCAAGCCCTTCTTCATATTTGTTGAAGGGTTGTAGATAG 3045 0.4003 MNGDRKIPVSPSKEQIDGAQKIRALHGRTTGPTRRSTKGNWTPEQDEILRKAVQHFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEVIIELVNKYGPKKWSTIAHHLPGRIGKQCRERWHNHLNPGINKEAWTQEEELTLIRAHQIYGNKWAELTKFLPGRTDNSIKNHWHSSVKKKLDSYLASGLLAQFQSAPLAGNPDQQMVLTSEMHSVGDGNGPKRTDREDVSECSQESADSAGLTSNVDLQTREVYKPEEESILGKDHNLSQASCPQHYYISLDDVDICIPEVACQDACCSQFAEQICSHKSGNALTGDYQFNCVDNSEMCNMVNVPFQTEGLGISTLMRPASMDPAKPNNMSISEDECCRFLFSEAVSDGCFSPRVYIKDMDMVDFSGCNMFLCQSCHIQIPSPRESSSTSQLTCPKCSNNFKGSSSSQSFPPVFSASVSRFVYAAEDNKLLGKEDHQIVSGGPDNVISSNGTSSSPCVDNIDSEVKQEQPETPKDSSKLVPVNSFGYGSNSKVTCYAKYGKLNEHSKKEDTGTLCYQPPCFPSLDIPFLSCDLAQSEPDMQQEFSPLGIRQLLMSPVTCLTPFRLWDSPSGGDNLDALFKSAAKTFTGTPSILSKRHRDLLSPLSDKRTDKKLVTDMPSSLIKSFSSLDFMFDDNENREADMISPTSLQKWSIAVSVDDDKENCGQTVKDKQVEEKNNSAISDEKNRENGTVKNSSQDSLKHQVDSKMKKIDIDTDNDDDNDNDNVEQPSGILVERNMNDIAPNSPGSDTVLGSSARTPKNLSNRRLEAIPNQRSPCSRVKCVRAKEHEKLSVDVTCVGTTSGKQAKNDGGFETSSIFGDTPFMKSIKSPSAWKSPWFINATFLCSPRIATEISIEDYGYLMSSGNRSYDAIGLMKQISEKTAATYANAQEVLENETPEALPKNASLNDEEGGQDDNHLQKQSAKHSQAASNALMERRILDFSECETTPSKGDNSKSSPVNFSSPSSYLLKGCR* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2848 1014 SUPERFAMILY Homeodomain-like 87 183 IPR009057 -
Ahy16g2848 1014 MobiDBLite consensus disorder prediction 1 42 - -
Ahy16g2848 1014 PANTHER TRANSCRIPTION REPRESSOR MYB5 326 1013 - -
Ahy16g2848 1014 PANTHER TRANSCRIPTION REPRESSOR MYB5 10 242 - -
Ahy16g2848 1014 MobiDBLite consensus disorder prediction 228 243 - -
Ahy16g2848 1014 MobiDBLite consensus disorder prediction 244 259 - -
Ahy16g2848 1014 MobiDBLite consensus disorder prediction 781 798 - -
Ahy16g2848 1014 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 140 IPR017930 -
Ahy16g2848 1014 ProSiteProfiles Myb-like domain profile. 33 84 IPR001005 -
Ahy16g2848 1014 SMART sant 37 86 IPR001005 -
Ahy16g2848 1014 SMART sant 89 138 IPR001005 -
Ahy16g2848 1014 SMART sant 141 189 IPR001005 -
Ahy16g2848 1014 MobiDBLite consensus disorder prediction 987 1008 - -
Ahy16g2848 1014 Gene3D - 37 89 - -
Ahy16g2848 1014 MobiDBLite consensus disorder prediction 702 731 - -
Ahy16g2848 1014 CDD SANT 92 136 IPR001005 -
Ahy16g2848 1014 MobiDBLite consensus disorder prediction 933 1014 - -
Ahy16g2848 1014 MobiDBLite consensus disorder prediction 222 259 - -
Ahy16g2848 1014 SUPERFAMILY Homeodomain-like 36 91 IPR009057 -
Ahy16g2848 1014 Gene3D - 90 141 - -
Ahy16g2848 1014 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 84 IPR017930 -
Ahy16g2848 1014 Gene3D - 143 202 - -
Ahy16g2848 1014 ProSiteProfiles Myb-like domain profile. 85 136 IPR001005 -
Ahy16g2848 1014 MobiDBLite consensus disorder prediction 740 756 - -
Ahy16g2848 1014 PANTHER MYB PROTEIN-RELATED 326 1013 - -
Ahy16g2848 1014 Pfam Myb-like DNA-binding domain 90 136 IPR001005 -
Ahy16g2848 1014 Pfam Myb-like DNA-binding domain 142 184 IPR001005 -
Ahy16g2848 1014 Pfam Myb-like DNA-binding domain 38 84 IPR001005 -
Ahy16g2848 1014 MobiDBLite consensus disorder prediction 702 798 - -
Ahy16g2848 1014 MobiDBLite consensus disorder prediction 481 500 - -
Ahy16g2848 1014 PANTHER MYB PROTEIN-RELATED 10 242 - -
Ahy16g2848 1014 CDD SANT 40 84 IPR001005 -
Ahy16g2848 1014 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 141 191 IPR017930 -
Ahy16g2848 1014 MobiDBLite consensus disorder prediction 482 500 - -
Ahy16g2848 1014 CDD SANT 144 184 IPR001005 -
Ahy16g2848 1014 ProSiteProfiles Myb-like domain profile. 137 187 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2848 Ahy-Chr16 142319519 142325167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2848 1 1014 MYB Transcription Factor Family AT4G32730 41.327 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy16g2848 Myb_DNA-binding 8.10E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2848 - K09420 ahf:112755435 2040
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2848 16 142319519 142325167 Ahy20g2274 20 124975595 124981627 PCT
Ahy16g2848 16 142319519 142325167 Ahy10g1810 10 101520098 101526089 PCT
Ahy20g2274 20 124975595 124981627 Ahy16g2848 16 142319519 142325167 PCT
Ahy10g1810 10 101520098 101526089 Ahy16g2848 16 142319519 142325167 PCT