Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2813 ATGGAACGCTCACTTTCGGAAGGGGAACCGAATAGCACAGTGATCAATGCTAGTGAAAGCAATGATGAATTGAATGATGATGGCGTTGTTAATCAAGAGGGTTCATTGGTCGACGAAATCACCGACGCAATGGTGACGAGAAATGATGAGTTGGATTTAAGACACGAGTTGCCAAATCATAGTGGGCTCAGTGAAGAGGAAATCTCAGTTATAGGAATGAGATTTGATTCGCTGCATTTGGCACAGGAGTTTTATGCAAGTTATGCAAAGAAATTGGGGTTTGTAACTAAAGTCAGGAACACGAACTTCAACAAGATGCGGAAGGACGCAAAGATACCCATTAATCAATCTCTTCACTGCACTCGAGAGGGTTATCGAGAATCTTGTGTTAAGGCAGTAACTAGGTCAAACAGAATAACAGCCACGAGATGCAAAGCAAGAATGTATGTCATGTTGGACAGGGAGAAGGAATGTTGGGTTGTGTCCAGGGTAGAATTGAGGCATTCTCACCCCTGTTCAGCTGAGAAAGCTGTGTCCACTATCATGAGTACTGGGAGCTGA 561 0.4367 MERSLSEGEPNSTVINASESNDELNDDGVVNQEGSLVDEITDAMVTRNDELDLRHELPNHSGLSEEEISVIGMRFDSLHLAQEFYASYAKKLGFVTKVRNTNFNKMRKDAKIPINQSLHCTREGYRESCVKAVTRSNRITATRCKARMYVMLDREKECWVVSRVELRHSHPCSAEKAVSTIMSTGS* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2813 186 MobiDBLite consensus disorder prediction 7 28 - -
Ahy16g2813 186 Pfam FAR1 DNA-binding domain 83 172 IPR004330 -
Ahy16g2813 186 MobiDBLite consensus disorder prediction 1 29 - -
Ahy16g2813 186 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 11 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2813 Ahy-Chr16 141602106 141603436 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy16g2813 FAR1 9.70E-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2813 - - ahf:112763810 323.939