Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2748 ATGGAAGTTTATCGTTCCTTAGGTGGTGCTCTAAAGCCAACAGATATTGACACGTTATGGGTTCATGTCACTTGTGCTTGGTTTCGGCCTGAAGTGGCTTTTGCTAGTGATGAGAAGATGGAGCCTGCTTTGGGTATTCTTAGTATTCCGTCAAGTTCTTTTGTTAAGATTTGTGTTATTTGTAAGCAAATTCATGGTTCATGCACACAATGTTGCAAGTGTTCTACTTATTTCCATGCCATGTGTGCATCAAGGGCTGGCTACCGAATGGAGTTGCACATTTCGGAGAAAAATGGTAAACAGACAACAAAAATGGTTTCCTATTGTGCTTATCACAGGGCTCCCAATCCAGACACTGTTTTGATTATGCAAACCCCCCTTGGGGTCATATCAACTAAAAGTCTTCTACAAACTAAGAAAAAAACGGGTTCCAGGCTAATTTCCTCTAGAAGAACAAAGGTAGAAGAAACCCCTCAAGCAGAAGATACTGAACATGAGCCATTCTCTGCCGCTAGATGTCGAATCTTTCAAAGAACAAACTACACTAAAAAGAAATCAGCAGCTGATGCCGTTCCTCATCATGTGAGGGGTCCCTACCATCATCCTTTAGATGCAATACAGAGTTTGAATGCTCCCTACCATCATCCATTAAGAGCACAACTAATTGTCCTCTCAGAATCTGCCTCCTCACTCATAACCGTCCCTCCCCCAACATCAGGCACACCTTTATTAAATATAGATAGTTGA 747 0.419 MEVYRSLGGALKPTDIDTLWVHVTCAWFRPEVAFASDEKMEPALGILSIPSSSFVKICVICKQIHGSCTQCCKCSTYFHAMCASRAGYRMELHISEKNGKQTTKMVSYCAYHRAPNPDTVLIMQTPLGVISTKSLLQTKKKTGSRLISSRRTKVEETPQAEDTEHEPFSAARCRIFQRTNYTKKKSAADAVPHHVRGPYHHPLDAIQSLNAPYHHPLRAQLIVLSESASSLITVPPPTSGTPLLNIDS* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2748 248 PANTHER PHD FINGER PROTEINS 8 214 - -
Ahy16g2748 248 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 115 IPR013083 -
Ahy16g2748 248 ProSiteProfiles Extended PHD (ePHD) domain profile. 1 113 IPR034732 -
Ahy16g2748 248 MobiDBLite consensus disorder prediction 148 168 - -
Ahy16g2748 248 MobiDBLite consensus disorder prediction 141 168 - -
Ahy16g2748 248 Pfam PHD-zinc-finger like domain 6 112 - -
Ahy16g2748 248 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATX4 8 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2748 Ahy-Chr16 140319854 140322292 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2748 8 112 C2H2 Transcription Factor Family AT3G14740 34.259 1.70e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2748 - - aip:107647579 416.772