Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2741 ATGTATGCAGAAACTGGTCTTTTCTTCCCGTATTTGCAGAACTTCTCTCAAGAGCTTCAACAGCTTGAGGAGTATTGCATGAACCAGAAATCCATTGATTCAATGAGTGACCTTGCTCAATCTTCAGCAATGACAGAGTATGATCTGTTAGTAGAAGGAGATTTGTTCAAAGCACCGGAACCTATCATAGAAGAACCACTGATAGATGTGGATCCAATGACTGCAGCAGCCATCTCAATGATATCTTGCGGGGAAGATGTATCCTCACAGGGTCTAGAATCTCAGGACATCGACATTCTTCAGAACGATAATCAGCTCTTGAGTGAGGTGTTCTACGAGTGCAAAAAGGATCTCATAGAGAAGGCAGCGATAGAGTCACCGCTGTCTGATATATTGGAAATCAATATTCCTGCTCTGAATGTAGATGACAGTTTCACTCAAGAAAATAAACCAATTCCTGATGTGCCATTGGCCAAGAGTGTCAGTTCTAGAAGCTTGAGTGCAATGGATTGGATGAATTCTGTTGGCATGAAGCCTACTTTTCTAGAATTCCCTGGAATTGATTTCAATGAGGTTTATGGCATGCGACGAGCATTTAGTGAGGGAGATATAAAGACACTTGGTAATGGAAACATGAATGTTGCTCAATCTCCCCATGATAGGCCTTCTCTTCTTAGCAACTGCACCAGCGAGGAACGGCAAGAAAAACTCTCGAGATATAGAAACAAGAAGACAAAGAGAAATTTTGGAAGGAAGATTAAGTATGCTTGCAGGAAGGCACTCGCCGACAGCCAGCCAAGAATCCGCGGAAGGTTTGCAAAGACGGAAGAATCCGACATAAAGAGGCAATGA 852 0.4272 MYAETGLFFPYLQNFSQELQQLEEYCMNQKSIDSMSDLAQSSAMTEYDLLVEGDLFKAPEPIIEEPLIDVDPMTAAAISMISCGEDVSSQGLESQDIDILQNDNQLLSEVFYECKKDLIEKAAIESPLSDILEINIPALNVDDSFTQENKPIPDVPLAKSVSSRSLSAMDWMNSVGMKPTFLEFPGIDFNEVYGMRRAFSEGDIKTLGNGNMNVAQSPHDRPSLLSNCTSEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEESDIKRQ* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2741 283 Pfam CCT motif 233 275 IPR010402 GO:0005515
Ahy16g2741 283 PANTHER CCT MOTIF FAMILY PROTEIN 26 281 - -
Ahy16g2741 283 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 26 281 - -
Ahy16g2741 283 ProSiteProfiles CCT domain profile. 233 275 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2741 Ahy-Chr16 140210375 140213944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2741 229 279 C2C2-CO-like Transcription Factor Family AT5G57660 49.020 4.53e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy16g2741 CCT 1.80E-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2741 - - gmx:100814332 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2741 16 140210375 140213944 Ahy16g2741 16 140210375 140213944 ECH