Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2731 ATGAAACAAAAGAAAAATTTTGATCTTGTCCATCTCAATGATCCCATTTCCAGAAAGCCTAAAGTAATTCGTATATTTCTAACTGATCAAGATGCTACTGACTCTTCCGGTGACGAAGAAGAAGAGTTCTTCCCTCGCCAAAGGGTGAGGCATTACATCAACGAAATTAATATTCACCCACCCTGCGAAACCGTTACCAATTCCCGAAAGAGGCTTGCCGGAATATCCTCCCCTTCATGTCGGCGACCAGTGAAGACCACTGTGGCAGCCGCCACCACCCCAACCACAGCCACCACCAATAACAACAATGGCAGAAAGTACCGTGGTGTAAGACAAAGGCCATGGGGTAAATGGGCGGCGGAGATTCGAGATCCAAACCGGCACATCCGAGTTTGGCTGGGAACTTTTGACACTGCCGAAGAAGCTGCCAGGGAGTATGATAATGCCGCGATCAAGTTTCGCGGTCCGAAAGCTCTAACCAACTTTCCGATATCACCACCATCACAAGAAAAGAATGTAGACATCTACGACTCATCATGCGAAGATGAGTGCCTCGTCAACATGTCTTCATCACCTACTTCGGTTCTCCATTCCACAAGTCCCAAAACAGGAAAACCACAGAAGCACCACAAAGAAAACGATGGAGAGTGTGAGGGGGAGACGAGTTTCTTTGATGATGAGACGTTGGGGAATGACATGTTTAACTTTGCAACTTTGCATGATGAGTGTGTGGCTACAATGTTTGATGATGAAACTACTTCTGCACGGGTCTTTGTTAGTGAAAGTTTCAAGTTTGGTGACCACATTGAGCTTGGTAATGCAAGTTTGTACCAGGTTGACGATTATTTTGAAGAAATTTTGCTAGGCTCGGATCCTCTTGTGGTGCTGTGA 891 0.459 MKQKKNFDLVHLNDPISRKPKVIRIFLTDQDATDSSGDEEEEFFPRQRVRHYINEINIHPPCETVTNSRKRLAGISSPSCRRPVKTTVAAATTPTTATTNNNNGRKYRGVRQRPWGKWAAEIRDPNRHIRVWLGTFDTAEEAAREYDNAAIKFRGPKALTNFPISPPSQEKNVDIYDSSCEDECLVNMSSSPTSVLHSTSPKTGKPQKHHKENDGECEGETSFFDDETLGNDMFNFATLHDECVATMFDDETTSARVFVSESFKFGDHIELGNASLYQVDDYFEEILLGSDPLVVL* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2731 296 SUPERFAMILY DNA-binding domain 106 165 IPR016177 GO:0003677
Ahy16g2731 296 PRINTS Ethylene responsive element binding protein signature 129 145 IPR001471 GO:0003700|GO:0006355
Ahy16g2731 296 PRINTS Ethylene responsive element binding protein signature 107 118 IPR001471 GO:0003700|GO:0006355
Ahy16g2731 296 SMART rav1_2 106 169 IPR001471 GO:0003700|GO:0006355
Ahy16g2731 296 CDD AP2 106 165 IPR001471 GO:0003700|GO:0006355
Ahy16g2731 296 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 17 286 - -
Ahy16g2731 296 Pfam AP2 domain 106 155 IPR001471 GO:0003700|GO:0006355
Ahy16g2731 296 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED 17 286 - -
Ahy16g2731 296 Gene3D AP2/ERF domain 105 165 IPR036955 GO:0003700|GO:0006355
Ahy16g2731 296 ProSiteProfiles AP2/ERF domain profile. 106 163 IPR001471 GO:0003700|GO:0006355
Ahy16g2731 296 MobiDBLite consensus disorder prediction 190 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2731 Ahy-Chr16 139891918 139893098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2731 21 197 AP2-EREBP Transcription Factor Family AT4G27950 47.872 1.23e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy16g2731 AP2 1.60E-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2731 - - adu:107494931 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2731 16 139891918 139893098 Ahy16g2731 16 139891918 139893098 ECH