Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2726 ATGAGCCAGTGTGTTCCCAGCTGGGAGGTGGAGGATACCAATCCACCGCCCCCAAGACCCTCTCTACGTTCCAACTCCAACTCAACCATCCCTGACGTTCCCATGTTAGACTATGAAGTCGCAGAACTAACATGGGAAAATGGACAGCTATCAATGCATGGCTTAGGGTTCCCGCGAGTGCCGACCAAGTCCTCGGCGGTTACAACAACCGCCAATAAGTACACATGGGAAAAGCCTCGTGCAAGTGGCACATTGGAATCCATAGTCAACCAAGCAACTACCACACCCCAAAACGCCAAATCAACAGCCGTCCACGGTTTCGGCGGTGTCTATGAAAATCTGTTAGTCCCATGGGTTGATCCCCACCGTGTCCCGGCCACCGTTATTTCTCCGGGAACTTCAAACACGGTGACCATGGACGCGCTGGTACCGTGCTCAAACCGGGTAGAGGAGCAAAGAACGCCTCAAGTTATGGACTCCATCTCCGGAGGGCTTGGAGCGTGCATGGCGGGTCGCACCACACGTATGGGCGCCGGTGATGCCAAAGATGGAGGCGCCCTTGAAAAACGCGCCGCCATGGTGAGACGTGTCCCGGCACCGACGGTGTCGGCACATGAGATGAGTAGCAGGGATCAGAGTGTGAGTGGCAGCGCCACCTTTGGGAGGGAAAGCCGGCACGTGACACTTGACACGTGCGAGAGGGAGTTCGGAGTGGGTTTCACTACCTCGACGTCGATGGGGTCGCCGGAAAATACAAGCTCTGCAAAGCAGTGCACCAAGACCAACACCATTGACGACCATGATTCCGTTTGCCACAGTAGATCAATGAGAGAGGATGGAGATGAGGAGGAGAAGAAGAAAGAAACTGGAAAATCTTCTGTGTCCACTAAAAGGAGTAGAGCCGCAGCTATACACAACCAATCTGAAAGGAAAAGGAGGGATAAGATAAACCAAAGGATGAAGACATTCCAAAAGCTGGTCCCAAATTCTAGCAAGACGGACAAAGCTTCAATGTTGGATGAAGTGATAGAATATCTTAAACAGTTGCAAGCACAAGTGCAGATGGTGAACAGGATCAACATGTCATCCATGATGCTTCCCATGACCATGCAACAACAGCTTCAAATGTCAATGATGGCTCCCATGGGCATGGGAATGGGGATGGGGATGGGCATGGGCATGGCGGGGATGGGCATGGGCATGGATATGAACACCCTTAGTCGCACTAATATCCCTCCTGGAATCCCTCCAGTCCTCCACCCTTCTCCCTTCATGCCTATGCCTTCTTGGGATGCTGCTGCTACCGCCACTGCTGCCGCCGCAACTGGAGCTGCCGACCGACTTCAAGGACCTACACCCTCCGCCATGCCTGACCATTTATCCTCATTTTTCGGATGTCCATCACAGCCCATGAGCATGGATGCGTACAGTAGGATTGCTGCCATGTACCAGCAGCTTCAGCACCAACAACCTCCACCTTCAGGTTCCAATAAGACCTGA 1500 0.53 MSQCVPSWEVEDTNPPPPRPSLRSNSNSTIPDVPMLDYEVAELTWENGQLSMHGLGFPRVPTKSSAVTTTANKYTWEKPRASGTLESIVNQATTTPQNAKSTAVHGFGGVYENLLVPWVDPHRVPATVISPGTSNTVTMDALVPCSNRVEEQRTPQVMDSISGGLGACMAGRTTRMGAGDAKDGGALEKRAAMVRRVPAPTVSAHEMSSRDQSVSGSATFGRESRHVTLDTCEREFGVGFTTSTSMGSPENTSSAKQCTKTNTIDDHDSVCHSRSMREDGDEEEKKKETGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTFQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMVNRINMSSMMLPMTMQQQLQMSMMAPMGMGMGMGMGMGMAGMGMGMDMNTLSRTNIPPGIPPVLHPSPFMPMPSWDAAATATAAAATGAADRLQGPTPSAMPDHLSSFFGCPSQPMSMDAYSRIAAMYQQLQHQQPPPSGSNKT* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2726 499 MobiDBLite consensus disorder prediction 240 317 - -
Ahy16g2726 499 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 300 349 IPR011598 GO:0046983
Ahy16g2726 499 CDD bHLH_AtPIF_like 300 361 - -
Ahy16g2726 499 MobiDBLite consensus disorder prediction 261 294 - -
Ahy16g2726 499 MobiDBLite consensus disorder prediction 240 260 - -
Ahy16g2726 499 MobiDBLite consensus disorder prediction 303 317 - -
Ahy16g2726 499 PANTHER TRANSCRIPTION FACTOR UNE10 1 496 - -
Ahy16g2726 499 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 1 496 IPR031066 -
Ahy16g2726 499 Pfam Helix-loop-helix DNA-binding domain 305 350 IPR011598 GO:0046983
Ahy16g2726 499 MobiDBLite consensus disorder prediction 1 31 - -
Ahy16g2726 499 SMART finulus 306 355 IPR011598 GO:0046983
Ahy16g2726 499 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 298 362 IPR036638 GO:0046983
Ahy16g2726 499 Gene3D - 295 360 IPR036638 GO:0046983
Ahy16g2726 499 MobiDBLite consensus disorder prediction 205 224 - -
Ahy16g2726 499 MobiDBLite consensus disorder prediction 199 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2726 Ahy-Chr16 139845956 139854259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2726 1 477 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 46.201 6.04e-95 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy16g2726 HLH 8.00E-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2726 - - ahf:112697399 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2726 16 139845956 139854259 Ahy6g2341 6 106886124 106893928 hybridization