Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2716 ATGGCACGGATTGCCAGGTCCTCTGCGCCGCGCCTACTCTACACCTTCTTCTCCTCCTCCGTGCCCCCGGCATCCCCATCGCCATCTCCGTCTCCGGCGTCGTCCCTCCTTGCCGGTGCATTCCACCTGCGGCACTTCTCGTCGGGCAACGCTGCTCGAGCGAGGGCGGCGGCGGCGGACAAGGAGCCATGGTGGAAGGAGTCCATGGAGCGGTTACGCAACATCGGGATCTCTGCTCACATCGACTCCGGCAAGACAACTTTGACGGAGCGAGTGCTTTTCTACACTGGTCGTATCCACGAGATCCACGAGGTTCGGGGCAGAGACGGCGTCGGCGCCAAGATGGATTCCATGGACTTGGAGAGGGAGAAAGGTATCACTATCCAGTCTGCTGCTACTTACTGCTCTTGGAAAGACTATAAGATTAACATAATTGACACACCTGGTCACGTTGATTTCACCATTGAAGTTGAGAGGGCTTTGCGTGTCCTTGATGGTGCTATTCTTGTACTTTGTAGTGTTGGTGGTGTGCAAAGTCAGTCCATCACAGTAGATCGACAAATGAGAAGATACGAGGTTCCAAGACTTGCATTTATTAACAAGCTTGATCGGATGGGAGCAGATCCATGGAAAGTTTTAAATCAGGCACGATCTAAGCTTCGGCATCATAGTGCTGCAATGCAAGTTCCGATAGGCTTGGAGGATGATTTTGAGGGACTTGTTGATCTTGTGCAATTAAAAGCATACTATTTTCGGGGTTCTAATGGTGAAAAAGTTGTCACTGAAGAGGTGCCTGCAGATATGGAAGCCTTGGTAGCAGAAAAAAGGCGTGAGCTCATAGAAGCTGTGTCAGAAGTTGATGATCAACTTGCTGAAGCTTTTCTTGGTGATGAGCCCATATCACCTGCTGACCTTCAGGGAGTACAGCCACTTCTGGATGGTGTACTTAATTATTTGCCATGTCCAATTGAAGTTAGTAGTTATGCCCTTGACCAAACAAAGAATGAGGAAAAGGTTGAGTTGACTGGAAGTCCTGATGGGCCACTTGTAGCGTTGGCATTTAAGTTGGAGGAAGGGCGGTTTGGCCAGTTGACATATTTAAGAATTTACGAGGGTGTGATCCGCAAGGGCGAGTTTATTATTAATGTAAACACCGGCAAGAAGATCAAGGTTCCTCGCTTAGTTAGGATGCATTCTGATGAGATGGAGGACATTCAAGAGGCTCATGCAGGGCAAATAGTTGCTGTATTTGGTGTTGATTGTGCATCAGGAGATACGTTTACTGATGGATCAGTTAAATACACAATGACTTCCATGAATGTTCCTGAACCTGTAATGTCATTAGCTGTACAGCCAGTTTCAAAAGATTCTGGAGGGCAATTTTCAAAAGCTTTGAATCGCTTCCAGAAAGAGGATCCTACATTCCGTGTTGGTTTAGACCCAGAGAGTGGGCAGACTATCATTTCTGGCATGGGAGAACTACATTTAGATATTTATGTTGAACGTATTCGGAGAGAGTATAAGGTTGATGCAACTGTTGGAAAGCCCCGTGTAAACTTCAGAGAAACTGTTACACAACGTGCTGATTTTGATTATTTACACAAGAAGCAATCTGGAGGGCAAGGTCAATATGGACGGGTAATCGGGTATATTGAACCACTTCCGGCAGGATCACCAACTAAATTCGAATTTGAAAACCTCCTTGTTGGGCAAGCTATTCCATCAGGTTTTATCCCTGCAATTGAAAAAGGTTTTAAGGAAGCCGCCAACTCGGGGGCTTTAATTGGACATCCTGTCGAAAATCTTAGAGTTGTCTTGACAGATGGTGCTGCTCATGCTGTTGATTCTAGTGAACTTGCATTTAAGTTGGCTTCTATCTATGCTTTCAGACAGTGCTATACAGCTTCCAGGCCAGTTATATTAGAACCTGTTATGCTTGTTGAGCTGAAAGTACCAACAGAATTCCAAGGAGCCGTTGCTGGTGACATTAACAAGAGAAAAGGTGTTATTGTTGGCAATGATCAGGAAGGAGATGACTCTATCATCACTGCCCATGTCCCTCTTAACAATATGTTTGGGTATTCTACAGCTCTTCGTTCAATGACCCAGGGGAAAGGTGAGTTCACAATGGAATACAAGGAGCATTCACCTGTATCTCATGAGGTACAGACGCAATTAATAAACTCCTACAAGGGCAAGGCGGCCGAATGA 2211 0.4609 MARIARSSAPRLLYTFFSSSVPPASPSPSPSPASSLLAGAFHLRHFSSGNAARARAAAADKEPWWKESMERLRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATYCSWKDYKINIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLNQARSKLRHHSAAMQVPIGLEDDFEGLVDLVQLKAYYFRGSNGEKVVTEEVPADMEALVAEKRRELIEAVSEVDDQLAEAFLGDEPISPADLQGVQPLLDGVLNYLPCPIEVSSYALDQTKNEEKVELTGSPDGPLVALAFKLEEGRFGQLTYLRIYEGVIRKGEFIINVNTGKKIKVPRLVRMHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKDSGGQFSKALNRFQKEDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDATVGKPRVNFRETVTQRADFDYLHKKQSGGQGQYGRVIGYIEPLPAGSPTKFEFENLLVGQAIPSGFIPAIEKGFKEAANSGALIGHPVENLRVVLTDGAAHAVDSSELAFKLASIYAFRQCYTASRPVILEPVMLVELKVPTEFQGAVAGDINKRKGVIVGNDQEGDDSIITAHVPLNNMFGYSTALRSMTQGKGEFTMEYKEHSPVSHEVQTQLINSYKGKAAE* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2716 736 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 306 735 - -
Ahy16g2716 736 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 1 306 - -
Ahy16g2716 736 SMART EFG_IV_2 517 637 IPR005517 GO:0005525
Ahy16g2716 736 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 70 323 IPR000795 GO:0003924|GO:0005525
Ahy16g2716 736 Pfam Elongation factor G C-terminus 640 725 IPR000640 -
Ahy16g2716 736 Hamap Elongation factor G [fusA]. 68 730 IPR004540 GO:0003746|GO:0005525|GO:0006414
Ahy16g2716 736 Gene3D - 643 713 - -
Ahy16g2716 736 SUPERFAMILY Ribosomal protein S5 domain 2-like 516 638 IPR020568 -
Ahy16g2716 736 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 320 IPR027417 -
Ahy16g2716 736 Gene3D Elongation Factor G (Translational Gtpase), domain 3 448 521 - -
Ahy16g2716 736 SMART EFG_C_a 639 726 IPR000640 -
Ahy16g2716 736 Pfam Elongation factor Tu GTP binding domain 71 320 IPR000795 GO:0003924|GO:0005525
Ahy16g2716 736 Pfam Elongation Factor G, domain III 441 515 IPR041095 -
Ahy16g2716 736 CDD EFG_mtEFG1_IV 520 633 IPR005517 GO:0005525
Ahy16g2716 736 TIGRFAM small_GTP: small GTP-binding protein domain 72 244 IPR005225 GO:0005525
Ahy16g2716 736 Pfam Elongation factor Tu domain 2 362 428 IPR004161 GO:0005525
Ahy16g2716 736 CDD EFG_III 442 517 IPR009022 -
Ahy16g2716 736 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 116 131 IPR031157 -
Ahy16g2716 736 Pfam Elongation factor G, domain IV 516 635 IPR005517 GO:0005525
Ahy16g2716 736 Gene3D Translation factors 330 447 - -
Ahy16g2716 736 CDD EF-G 74 322 - -
Ahy16g2716 736 SUPERFAMILY EF-G C-terminal domain-like 439 516 IPR035647 -
Ahy16g2716 736 PRINTS GTP-binding elongation factor signature 143 153 IPR000795 GO:0003924|GO:0005525
Ahy16g2716 736 PRINTS GTP-binding elongation factor signature 74 87 IPR000795 GO:0003924|GO:0005525
Ahy16g2716 736 PRINTS GTP-binding elongation factor signature 123 131 IPR000795 GO:0003924|GO:0005525
Ahy16g2716 736 PRINTS GTP-binding elongation factor signature 159 170 IPR000795 GO:0003924|GO:0005525
Ahy16g2716 736 PRINTS GTP-binding elongation factor signature 195 204 IPR000795 GO:0003924|GO:0005525
Ahy16g2716 736 Gene3D - 522 727 IPR014721 -
Ahy16g2716 736 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 306 735 IPR045044 -
Ahy16g2716 736 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 1 306 IPR045044 -
Ahy16g2716 736 SUPERFAMILY EF-G C-terminal domain-like 639 731 IPR035647 -
Ahy16g2716 736 Gene3D - 64 325 IPR027417 -
Ahy16g2716 736 CDD mtEFG1_C 642 719 IPR035649 -
Ahy16g2716 736 CDD mtEFG1_II_like 349 429 - -
Ahy16g2716 736 SUPERFAMILY Translation proteins 306 439 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2716 Ahy-Chr16 139659027 139670313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2716 364 524 Eukaryotic Initiation Factors Gene Family AT3G22980 24.719 4.58e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2716 K02355 - gmx:100783315 1321.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2716 16 139659027 139670313 Ahy6g2326 6 106704686 106715878 hybridization