Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2702 ATGGAAAGTGATGATACTGAAGAAAAATTCCTTAGCACTGTGCAAGTCTCCACCACTTCAAACTCCTCAAATTCAAGCACCATTAAAGAAAGAATCTCATCAAGAAGAGCATGTCAAATGTCCAAAAACGGCAACGAGTGCAAGAAAATGGAGAAGAACAATGGCGACTACTACGCAGGGATGCATCACCCAACATACAGAGGTGTGAGAATGAGGGCATGGGGGAAGTGGGTGTCTGAGATCCGGGAGCCAAGAAAGAAATCAAGAATTTGGCTGGGAACATATAGAACCGCTGAAATGGCGGCAAAAGCGCATGACGTGGCGGCTTTAGCCATCAAAGGCCCTTCAGCTTACCTCAATTTCCCTAAAATGGCTCGGCGTTACCCAAGGCCAGTCAGTACATCTCCTAAGGACATTCAAGCTGCGGCCTCCAAGGCGGCAGCCGTCGAGAACAATACTGAAGCTGATGCTGAACAAGAACAACAAAATCATGGCCTAATAATGGAATCTTCAACTTCCACTAATAATAGTAATGAGCAAGAATCTTCAAGTATGGATGATGATGATGATGGCGCATTGTTTGACCTGCTACCAGATCTTTTCTCCGACGATGGAAAGAGTACTGCATCTTCTTCCTCTTATTCTCCTTCTTGGCATCTACTATTTGCAGTTGATTATGGATTCAGGCTTGAGGAGCATTTTTTGTGGGAGAATTAA 717 0.4449 MESDDTEEKFLSTVQVSTTSNSSNSSTIKERISSRRACQMSKNGNECKKMEKNNGDYYAGMHHPTYRGVRMRAWGKWVSEIREPRKKSRIWLGTYRTAEMAAKAHDVAALAIKGPSAYLNFPKMARRYPRPVSTSPKDIQAAASKAAAVENNTEADAEQEQQNHGLIMESSTSTNNSNEQESSSMDDDDDGALFDLLPDLFSDDGKSTASSSSYSPSWHLLFAVDYGFRLEEHFLWEN* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2702 238 MobiDBLite consensus disorder prediction 154 181 - -
Ahy16g2702 238 SMART rav1_2 65 128 IPR001471 GO:0003700|GO:0006355
Ahy16g2702 238 MobiDBLite consensus disorder prediction 1 47 - -
Ahy16g2702 238 SUPERFAMILY DNA-binding domain 65 122 IPR016177 GO:0003677
Ahy16g2702 238 Gene3D AP2/ERF domain 65 124 IPR036955 GO:0003700|GO:0006355
Ahy16g2702 238 CDD AP2 66 122 IPR001471 GO:0003700|GO:0006355
Ahy16g2702 238 MobiDBLite consensus disorder prediction 10 41 - -
Ahy16g2702 238 Pfam AP2 domain 64 114 IPR001471 GO:0003700|GO:0006355
Ahy16g2702 238 PANTHER ETHYLENE RESPONSE FACTOR 9 238 - -
Ahy16g2702 238 ProSiteProfiles AP2/ERF domain profile. 65 122 IPR001471 GO:0003700|GO:0006355
Ahy16g2702 238 PRINTS Ethylene responsive element binding protein signature 88 104 IPR001471 GO:0003700|GO:0006355
Ahy16g2702 238 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Ahy16g2702 238 MobiDBLite consensus disorder prediction 129 189 - -
Ahy16g2702 238 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2702 Ahy-Chr16 139347393 139348414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2702 49 235 AP2-EREBP Transcription Factor Family AT2G44940 50.943 3.02e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Ahy16g2702 AP2 9.50E-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2702 - - gmx:100801129 192.971