Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2687 ATGAAGAAAGCGGAAGGGGAGAGTAGTTTAGACAGTGATGTTATTGCATCTGAGATCAAAGCAGGATCAGTAAGTGATCCACCGGCCGACGCTGTTGGAGGAACCATTCAAAATGATTCAGAGAAGAGAAAGGCCAAAGATGAAGCGAAAAACACAATCCCCTTCTACAAGCTCTTCTCTTTTGCAGACGCTTTGGATTATGCATTGATGATTGTGGGGACAATCGGTGCTGTTGGAAATGGAATGGCAAACCCTTTGATGACCGTTGTTTTTGGGAACTTAATTGATGCATTTGGAGGGACCTCAAACTCCCAAAAAGTTGTTCATGATGTTTCCAAGCTGGCTCTCAAGTTTGTATACCTGGCTCTGGGTTCCTTTGCAGGATCCTTTCTTCAGGTTTCTTGCTGGATTGTCTCCGGGGAGCGACAATGTGCAAGAATAAGAAGCTTATACCTGAAAACAATTCTGAGGCAGGATGCCGGCTTCTTCGATACGGAAACCAACACCGGCGAGGTTGTTGGAAGGATGTCAAGTGACACTATGCTAATTCGAGAAGCCATGGGTGAGAAGGTAGGACAGTTTGTACAGTTAGTGGCATCGTTCGTTGGAAGTTTTGTCATAGCGTTCATCAAGGGATGGCTTCTTACCCTTGTTTTGCTGTCCAGTATTCCACCTCTTGTTCTTGCTAGCGCCGTCATGAGTATCGTTATTGCCAAAGTGACATCGCGAAGACAAGTAGCATATTCTGCAGCTGCATCTGTAGTAGAAGAGACAATTGCTTCTATCAGAACTGTTGCATCATTCACGGGCGAGAAGCAAGCCGTGGCTAAGTATAATCAATCATTGTTGAAAGCTTATAAGACTGGAGTTCAAGAAGGAGTGGCTTCTGGATTGGGATTTGGTTCCATTCTTCTCATTGTTTTCTGCACTTATGCTTTGGCCATATGGTATGGTGGCAAATTGATTTTAGACAAAGATTATACAGCAGGGAAAATTATCACCATAATTTTCGCAATTTTGACAGGATCTCATTCTCTTGGACAGACCTCTCCTAGCATGAGTTCGTTTGCAGCAGGACAAGCCGCGGCTTATAAGATGTTTGAAACGATTAATAGGCGACCTGATATCGATGCTTACGACACAACTGGCCGGCAGCTCGATGATATTCGAGGCGACATAGAACTGAGAGAAGTTGGCTTCAGTTATCCGTCAAGGCCGGATGAGACCATATTCAATGGATTCTCTTTGTTCATACCAAGTGGCACAACTGTAGCTTTGGTAGGGCAAAGTGGGAGTGGAAAATCAACCGTTATTAACTTGATAGAGAGGTTTTATGATCCGCAAGCTGGTGAAGTTCTCATCGACAACATCAATCTCAAAGAGTTTAATCTGAAATGGATAAGACAAAAGATTGGCCTAGTTAGCCAAGAACCTGTTCTGTTTACTTGCAGCATCAAAGAAAATATTGCTTATGGTAAGGATGGTGCGACTGATGAAGAAATCAAAGTAGCAGCAGATCTTGCAAATGCTTCTAAGTTCATAGACACGCTTCCACAGGGACTGGACACGATGATTGGTGAACACGGAACTCAGCTCTCTGGAGGTCAAAAGCAGAGAGTTGCAATAGCAAGAGCCATTTTGAAAGATCCAAGAATTCTACTTCTTGATGAAGCTACAAGTGCACTTGATGCTGAATCCGAGAAAACAGTGCAGGAGGCTCTAGACAAAATCATGATAAATCGAACCACTGTTATTGTAGCTCACCGCTTAAGCACTGTTAGAAATGCTGCCACTATAGCTGTAATTCATCAAGGAAAAATAGTAGAAAAAGGTTCACATTCTGAGCTAACTAAAGATCTTGAAGGAGCCTACAGCCAACTCAACAGATTGCAAGAGACTAACAGTGAGGCAGAACAGAATTTTTTTGTTGAAACAGAAAACCTTGAATCTACTATAAATTCTTCAAGGCATTCAAGTCAACGGTTTTCTTTTAGAAATTCCACAACTCATGTATCCGGCGTTGGAAACAGCAAAGACGATAAAGTTGCTCTTTCAGAAGACACAAACTCAAAACAACCTCCAAAAATACCGATCCGTCGCTTAGCTAAACTAAACAAACCTGAGATCCCAGTCTTAATATTAGGGACTATAGCTGCAGTGGCCAATGGCATCATATTACCCTTTTTCGGGTTCATGGTATCAAAGATGGTCAATATTTTCTATGAGCCTGCGGATGAACTCCGCAAAGATTCAAGATCTTGGGCGTATGTTTTCGTGGCGCTTGGCGTATCAGCGTTCTTTATCAATCCCTTGAGGTCCTACTTCTTTTCTGTTGCTGGTGAAAAGCTGGTAAAAAGAATGAGACTAATCTGTTTTGAGAAAATGATTAATATGGAAGTTAGTTGGTTTGATGAAGCTGAGCATTCAAGTGCTGCACTTGGATCAAGACTGTCCACTGATGCAGCGTCTATTCGAGCTTTGGTTGGCGACGCGCTCGGATTAATGGTTCAGAACATAGCTGCTGCAGTTGCAGGCCTGGTGATTGCATTCCAAGCAAACTGGCAGCTCTCTCTTATAATTCTTGTATTGCTGCCTATATTAGCACTTAACGGAATTCTTCAGATGAAGTTCTTACAAGGATTCACTGCAGATGGAAAGAAATTATACGAGGAAGCAAGTCAAGTAGCAAGTGATGCTGTAAGCAGCAGTAGGACTGTGGCATCTTTCTGCGCTGAAGAGAAGGTGATGGAGTTGTACAAGAAGAAATGTGAGGCACCGATTAAGGCAGGCATAAAGCAAGGGATAATAAGTGGAGTTGGTTTTGGGTTATCATTCTTTTTTCTGTTTTCAGTGTATGCATGTAGTTTCTATGCTGGAGCTAAACTTGTAGGGGATGGTAAAGCATCTTTCTCTGATGTTTTCCGCGTCTTCTTTGCCCTGAATATGGCTGCTGTGGGGATGTCTCAAACTAGCACCTTGGCCCCTGACTCAGCTAAAGCTAAAAGTGCTGCTGCTTCTGTGTTGGCCATTATTGACAGAAAATCAAAAGTAGATCCCAATGATGACAATGGTCTGATTCTAGAAAACTTGATGGGAAAAGTAGAGTTTAACCATGTCACTTTCAAGTACCCCACAAGACCTGATGTTCAAATATTTAGAGATCTTTGCTTGACTATTTATTCTGGCAAGACAGTTGCATTGGTTGGTGAAAGTGGAAGTGGAAAATCAACTGTAGTATCACTGTTACAAAGATTTTACGACCCAGATACAGGTTATATCACACTTGATGGAATAGATATCCAGAAAATTCAAGTTACATGGTTAAGACAACAGATGGGCTTGGTAAGCCAAGAGCCTATTTTGTTTAATGATACAATCAGAGGCAACATTGCATATGGAAAAGGAACACATGCAACAGAGGCAGAGATTACAGCTGCAGCAGAAATGGCAAATGCCCACAAGTTCATCAGTAGTTTGCAACAGGGTTATGAAACCATTGTGGGGGAAAGAGGATCAAAACTATCTGGTGGACAGAAGCAGCGGGTGGCAATTGCAAGAGCAATAGTGAAGAATCCAAAAATATTACTACTAGATGAAGCCACCAGTGCCCTGGATGCAGAGTCTGAAAAGGTTGTTCAAGATGCACTAGATAGAGTAATGGTGGAACGAACCACAATCATAGTGGCTCATAGGTTATCCACTATTAAGAACGCAGATTTAATTGCAGTGGTTAAGAATGGGGTCATTGTAGAGAAAGGAAACCATGAAACATTGATCAACCATGGTGGCCATTATGCTTCCTTGGTAGCATTGCACACAAGTACATCATAA 3831 0.4221 MKKAEGESSLDSDVIASEIKAGSVSDPPADAVGGTIQNDSEKRKAKDEAKNTIPFYKLFSFADALDYALMIVGTIGAVGNGMANPLMTVVFGNLIDAFGGTSNSQKVVHDVSKLALKFVYLALGSFAGSFLQVSCWIVSGERQCARIRSLYLKTILRQDAGFFDTETNTGEVVGRMSSDTMLIREAMGEKVGQFVQLVASFVGSFVIAFIKGWLLTLVLLSSIPPLVLASAVMSIVIAKVTSRRQVAYSAAASVVEETIASIRTVASFTGEKQAVAKYNQSLLKAYKTGVQEGVASGLGFGSILLIVFCTYALAIWYGGKLILDKDYTAGKIITIIFAILTGSHSLGQTSPSMSSFAAGQAAAYKMFETINRRPDIDAYDTTGRQLDDIRGDIELREVGFSYPSRPDETIFNGFSLFIPSGTTVALVGQSGSGKSTVINLIERFYDPQAGEVLIDNINLKEFNLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDGATDEEIKVAADLANASKFIDTLPQGLDTMIGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESEKTVQEALDKIMINRTTVIVAHRLSTVRNAATIAVIHQGKIVEKGSHSELTKDLEGAYSQLNRLQETNSEAEQNFFVETENLESTINSSRHSSQRFSFRNSTTHVSGVGNSKDDKVALSEDTNSKQPPKIPIRRLAKLNKPEIPVLILGTIAAVANGIILPFFGFMVSKMVNIFYEPADELRKDSRSWAYVFVALGVSAFFINPLRSYFFSVAGEKLVKRMRLICFEKMINMEVSWFDEAEHSSAALGSRLSTDAASIRALVGDALGLMVQNIAAAVAGLVIAFQANWQLSLIILVLLPILALNGILQMKFLQGFTADGKKLYEEASQVASDAVSSSRTVASFCAEEKVMELYKKKCEAPIKAGIKQGIISGVGFGLSFFFLFSVYACSFYAGAKLVGDGKASFSDVFRVFFALNMAAVGMSQTSTLAPDSAKAKSAAASVLAIIDRKSKVDPNDDNGLILENLMGKVEFNHVTFKYPTRPDVQIFRDLCLTIYSGKTVALVGESGSGKSTVVSLLQRFYDPDTGYITLDGIDIQKIQVTWLRQQMGLVSQEPILFNDTIRGNIAYGKGTHATEAEITAAAEMANAHKFISSLQQGYETIVGERGSKLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDRVMVERTTIIVAHRLSTIKNADLIAVVKNGVIVEKGNHETLINHGGHYASLVALHTSTS* 1277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2687 1276 Pfam ABC transporter 412 560 IPR003439 GO:0005524
Ahy16g2687 1276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1022 1271 IPR027417 -
Ahy16g2687 1276 ProSitePatterns ABC transporters family signature. 1174 1188 IPR017871 GO:0005524
Ahy16g2687 1276 CDD ABC_6TM_Pgp_ABCB1_D2_like 702 1017 - -
Ahy16g2687 1276 CDD ABC_MTABC3_MDL1_MDL2 393 631 - -
Ahy16g2687 1276 CDD ABC_6TM_Pgp_ABCB1_D1_like 70 366 - -
Ahy16g2687 1276 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 393 629 IPR003439 GO:0005524
Ahy16g2687 1276 CDD ABC_MTABC3_MDL1_MDL2 1034 1269 - -
Ahy16g2687 1276 Pfam ABC transporter 1054 1202 IPR003439 GO:0005524
Ahy16g2687 1276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 385 631 IPR027417 -
Ahy16g2687 1276 ProSitePatterns ABC transporters family signature. 532 546 IPR017871 GO:0005524
Ahy16g2687 1276 Pfam ABC transporter transmembrane region 712 984 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy16g2687 1276 Pfam ABC transporter transmembrane region 70 343 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy16g2687 1276 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 713 999 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy16g2687 1276 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1034 1271 IPR003439 GO:0005524
Ahy16g2687 1276 SUPERFAMILY ABC transporter transmembrane region 57 377 IPR036640 GO:0005524|GO:0016021
Ahy16g2687 1276 MobiDBLite consensus disorder prediction 654 692 - -
Ahy16g2687 1276 Gene3D - 383 632 IPR027417 -
Ahy16g2687 1276 Gene3D - 1025 1275 IPR027417 -
Ahy16g2687 1276 PANTHER - 30 1273 - -
Ahy16g2687 1276 MobiDBLite consensus disorder prediction 19 45 - -
Ahy16g2687 1276 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 30 1273 - -
Ahy16g2687 1276 SUPERFAMILY ABC transporter transmembrane region 694 1019 IPR036640 GO:0005524|GO:0016021
Ahy16g2687 1276 Gene3D ABC transporter type 1, transmembrane domain 57 1004 IPR036640 GO:0005524|GO:0016021
Ahy16g2687 1276 SMART AAA_5 1061 1254 IPR003593 -
Ahy16g2687 1276 SMART AAA_5 420 613 IPR003593 -
Ahy16g2687 1276 Coils Coil 613 640 - -
Ahy16g2687 1276 MobiDBLite consensus disorder prediction 654 675 - -
Ahy16g2687 1276 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 71 358 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2687 Ahy-Chr16 138962751 138968871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2687 22 1275 Calmodulin-binding Proteins AT2G36910 43.784 0.0 1055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2687 K05658 - gmx:100800293 1723.37