Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2685 ATGGATCTGAAGAACTGCTTCTTGCTACTCTTGTTGACGAGCTTCTTGGTTTGTGGTTGTTCGCAGGTTGAAGACGACGTGAGTTGCCTGAAAGGCTTCAAGGACTCTTTGAGTGACCCTCAACAGAGACTCGCCAAGTGGAATTTGGAAAACAAGACAGCCGGTTTCGTCTGCAACTACGAAGGTGTGTCATGCTGGAACCCGCAGGAGAATCGTATTATTGGTCTTGATCTTAGTGGGATGAATCTATCCGGTAAGATTCCGGAGTCCATCAAGTACTGCAGTAAGAATCTTCAGAAGCTCGTACTTGGATCCAACTCGCTCTCAGGTTCGATTCCTCCCAAGATCTGTGATTGGTTGCCGTATTTGGTCACACTGGACCTTTCTAGCAACGATCTTTCTGGTCCTATTCCGGCTGCGTTAGAGAATTGTTCTTACTTGAACGAGTTAGAGATATCCGATAACGACCTTTCGGGTCCAATTCCCGCTGAAATTGGGAGCTTGGTGAGGCTGAATAAGTTCTCGGTTGCTAACAATCATCTCACCGGCGCGATCCCTGGCTCTCTTTTGCGGTTTGGGAAGGAAGCCTTTGATGGGAATAGTGGGCTGTGTTCCAAGTGTGGTGGATTGAGCAAGAAGAATCTTGCCATTATTATTGCTGCTGGGGTGTTTGGTGCTGCGGTTTCGTTGTTGTTAGCTTTTGGGTTGTGGTGGTGGTACCATTTGGGATCGAGTAGGGATAAGAGAGGGTATGGGATTGGAAGCACTACCGATGGTGGTGATAATTGGGCTTTGAGTTTGAGGGGTCACAAGCTTGTTCAGGTTACTCTGTTTCAGAAGCCTATTGTGAAGGTTAAGTTAGGGGATTTGATGGCTGCAACTAATAACTTTAGTGCTGAGAATGTTCTTATGGCGACGAGGACGGGGACTACTTATAAGGCGGATCTTCGTGATGGGTCCACGCTCGCGGTGAAGCGGCTTAGTAAGTGTAAGATTGGGGAGAAGCAGTTTCGGATGGAGATGAATAGGTTAGGCGAGGTTAGGCACCCGAATTTGGCTCCCCTGTTGGGTTTCTGTGTGGTGGAAGATGAGAAGCTTTTGGTTTATAAGCACATGTCAAATGGGACTCTCTATAGCTTGTTGCATAAGAATCGTGGTGTGTTGGATTGGGAGATGAGGTTCAGAATTGGATTGGGCGCAGCAAGGGGCCTCGCATGGCTACACCACGGGTGTCATCCTCCAATTATACAGCAGAATATCTGCTCCAATGTGATTCTTGTCGATGAAGATTTTGATGCGCGGATAATGGACTTTGGGCTTGCCAGGCTGTTGACATCTGATACTAATGAGAGTAGTTTTGTTAATGGGGATCTGGGAGAACTTGGCTACGTTGCGCCGGAGTATCCGAGTACAATGGTTGCTTCTTTAAAAGGGGATGTTTATGGTTTTGGAATTGTGCTTCTGGAGTTGGCGACCGGTCGAAAACCTCTCGATGTCAACAATGTAGAGGAAGAATTTAAGGGTAATTTGGTGGATTGGGTGAACAAGCTTTCTAGTTCAGGTAGAGCAAAGGATTGCATTGATAAAGCTATATTTGGAAGGGGACATGACGAGGAGATACTCAAGTTCATGAAAATAGCGTCTAGTTGTGTAGTTCCTCACCCTAAGGAGAGGTTGTCTATGTTCGAGGTTTATAATTCCTTGAAGAGTATGGCAAAAGATCACAGTTTCTCTGAATATGATGATGAATTTCCATTGATCTTTGGTAAACCCGGAAATGAGAGGGGTTAG 1791 0.4612 MDLKNCFLLLLLTSFLVCGCSQVEDDVSCLKGFKDSLSDPQQRLAKWNLENKTAGFVCNYEGVSCWNPQENRIIGLDLSGMNLSGKIPESIKYCSKNLQKLVLGSNSLSGSIPPKICDWLPYLVTLDLSSNDLSGPIPAALENCSYLNELEISDNDLSGPIPAEIGSLVRLNKFSVANNHLTGAIPGSLLRFGKEAFDGNSGLCSKCGGLSKKNLAIIIAAGVFGAAVSLLLAFGLWWWYHLGSSRDKRGYGIGSTTDGGDNWALSLRGHKLVQVTLFQKPIVKVKLGDLMAATNNFSAENVLMATRTGTTYKADLRDGSTLAVKRLSKCKIGEKQFRMEMNRLGEVRHPNLAPLLGFCVVEDEKLLVYKHMSNGTLYSLLHKNRGVLDWEMRFRIGLGAARGLAWLHHGCHPPIIQQNICSNVILVDEDFDARIMDFGLARLLTSDTNESSFVNGDLGELGYVAPEYPSTMVASLKGDVYGFGIVLLELATGRKPLDVNNVEEEFKGNLVDWVNKLSSSGRAKDCIDKAIFGRGHDEEILKFMKIASSCVVPHPKERLSMFEVYNSLKSMAKDHSFSEYDDEFPLIFGKPGNERG* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2685 596 Gene3D Transferase(Phosphotransferase) domain 1 372 587 - -
Ahy16g2685 596 Pfam Leucine rich repeat N-terminal domain 24 66 IPR013210 -
Ahy16g2685 596 Gene3D Ribonuclease Inhibitor 23 209 IPR032675 -
Ahy16g2685 596 PANTHER RECEPTOR-LIKE PROTEIN 55 9 594 - -
Ahy16g2685 596 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Ahy16g2685 596 Gene3D Phosphorylase Kinase; domain 1 258 371 - -
Ahy16g2685 596 Pfam Protein tyrosine and serine/threonine kinase 310 500 IPR001245 GO:0004672|GO:0006468
Ahy16g2685 596 SUPERFAMILY L domain-like 20 194 - -
Ahy16g2685 596 SUPERFAMILY Protein kinase-like (PK-like) 274 568 IPR011009 -
Ahy16g2685 596 ProSiteProfiles Protein kinase domain profile. 297 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g2685 596 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2685 Ahy-Chr16 138946367 138948637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2685 6 595 Receptor kinase-like Gene Family AT3G28450 63.079 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Ahy16g2685 PK_Tyr_Ser-Thr 6.70E-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2685 - - gmx:100810378 874.389