Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2682 ATGGAATCACAAGAGACATCTTCAGTAGGAGCAGAAGCACTTCTACATATGTCTCCTGGATCAGCGGTTTCTGTTGCATACCACCCTCTGTTTGGACCACATGATGATCTGATCGTTCTAGAGCTTGATGATAAACTTCTTCCCGATGTTCTGCATGAAAGGGTGGTAATAAGAGGACTGCCCGATGAAGACGCAGTTCTTTGTACTCAATCCAAAACATTTGCAATGAAGTTCGTTGGAACTTCAAATTCTGTTTTGCTTATACCTCCTGCAAATCAATATGTTTTTGATCAAAATCCACAAAACGGTGCAAATAATCACAAGGAGAAGGTTGTTGCACCTGTGATTAAAGTTGTACCTGGTAATATGGAGCTTGTTGAGGTTGCTCCCAGACTTGACAAACTTAAATTGCTCCTCTCGCAGAACCCTTGCAGGCTTGAAGAGTTTGACAGTTCAGAAGTGAATCCAGAAAGTAGAGCAGGATTATATAACTGGAAGGATCTTAAAAACAATATTCAAGCTAGTGACGAGGAACTAAGATCCGGACTGCAGGCACTATCGGCTGTGGAGATTAATAGCTATTGGAGACTAGTAGACGAGAGATACATGAACACGATTCTGGAAATGGTTTTGAGAAATGCAGTGTTGAACGACTGGTCACTGAGTGCTCTTAATGAAGATGAAGTCGTAAGCATGCTGGTTTCTGATGGATTTCCTGCAGAACTTGCAAGGCATTGCTTGCACGTATATGGTGAGAAAGTAATTGACGGCACGGATACTTGTGCATGGAAGTTAGACAAGAAGCGGGTCTGCATTCATTTTGCGAGAGAAATCCTGAGAGGGGGCAAGATGAAGCTGGAGAGTTTTATGGATGAGTGGAGGCAGAGGACTCCAGATGAAATGCAGCCAACTTTTGATCTTGCCGAAGGAGAAGTTTTGACAGAGAGAATTGGAGTCGAGACATGGGTCCGCGGATTCAGTGTCTCTTCGTTGCCATCCACTCCGGCTGAACGATTCTCGATTCTTTTCAAAGAGCGGCCAAAATGGGAATGGAAAGATCTGCAGCCTTATATTAGGGATCTGAATGTGCCAGGTCTTACTTCTGAAGGTTTGCTATTGAAATATACTCGAAGAACACAACCATCACCTGAAATAGAACCAATTTTCAGTGCAAGATAG 1179 0.4317 MESQETSSVGAEALLHMSPGSAVSVAYHPLFGPHDDLIVLELDDKLLPDVLHERVVIRGLPDEDAVLCTQSKTFAMKFVGTSNSVLLIPPANQYVFDQNPQNGANNHKEKVVAPVIKVVPGNMELVEVAPRLDKLKLLLSQNPCRLEEFDSSEVNPESRAGLYNWKDLKNNIQASDEELRSGLQALSAVEINSYWRLVDERYMNTILEMVLRNAVLNDWSLSALNEDEVVSMLVSDGFPAELARHCLHVYGEKVIDGTDTCAWKLDKKRVCIHFAREILRGGKMKLESFMDEWRQRTPDEMQPTFDLAEGEVLTERIGVETWVRGFSVSSLPSTPAERFSILFKERPKWEWKDLQPYIRDLNVPGLTSEGLLLKYTRRTQPSPEIEPIFSAR* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2682 392 Pfam Sister chromatid cohesion protein Dcc1 39 358 IPR019128 GO:0007064|GO:0031390
Ahy16g2682 392 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 7 392 IPR019128 GO:0007064|GO:0031390
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2682 Ahy-Chr16 138899476 138903598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2682 10 392 C3H Transcription Factor Family AT2G44580 56.010 7.85e-161 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2682 K11271 - gmx:100817511 594.349