Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2680 ATGTCTCTGCTTCTCCAAGTGTTCCTCCTCCTGATATGTGCTTCTCCATCTCTCCCCGCCAAGACCTCAGAGCTTGAAGCTCTCATGACCATCAAAGAATCTCTTGACCCACAAAACCGTGTGTTGACTTCGTGGACCCCACACTCCGACCCATGTAGCAGTTTCCCTGGCCATTTTGAGGGCGTGGCTTGCAACCAAGAAGGTCTTGTAGTGAATATCTCACTGCAAGGAAAGGGTCTCTCTGGAAGCATACCTGCCGCCATTTCTAGTCTTAAGAGCTTGACTGGTCTCTATCTTCACTTCAACTCTCTCAGTGGAATTTTACCCAAGGAGATTTCCTCCTTGATTCACCTCACTGACTTGTATCTCAATGTCAATTCTCTCTCTGGTGATATCCCTCGTCAGATTGCCAACCTCTCTAATCTTCAAGTTTTGCAGATTAGCTATAACGAGTTCAGTGGCGGTGTACCTTCTGAACTAGAGAAGTTGAAGAAGCTTAGCGTTCTTTCGCTGCAATATAATCAATTATACGGCGCAATTCCAGCGAGTTTGGGTGAATTGGAGTCACTAACACGATTAGATCTGAGCTTCAACCAATTTTTCGGTCCAATCCCAGTGAGTTTGGGTTATGCACCCAAACTGCAGATTCTAGATGTTCGAAACAATTCTCTCTCGGGGAATATCCCTAAAGCACTAGAAAGACTTAAAGGTGGATTCCAGTACATGAACAATCCTGGTTTATGTGGAACCGGATTCGCTGATTTATCTCCTTGTAGAGCAGTAATCAGTTCAGACCCGGTCAGACCGGAACCATACGAGCCTGGTAATCTTTCTTCAGAAGTTCTTCCAACGACGGTTCAACCAAAAGATATAAAGCCATCAAAACCATCGAATATCGGTTTGGTTTTCGCGGTAATTGCAGTTACTTTTGCTTCAACCATCTTTGGCCTGTTTATAGTGTTATGGTATCGGCATCAGAAATTGAAAATTGGACGCACTGCTAACACTACTAGCAAGATGAAGGAAGCACGCAAGAAAATTTCATCTCCTCTGATAAGTTTGGAGTACTCCAATGGATGGGATCCATTAGCCAAAGGGCAAAGTGGTTATTCCCAGGAATTCCTAGAGAGCTTAATGTTCAACGTTGAAGATGTGGAACGCGCAACACAGTGTTTCTCAGAGCTAAATTTGTTGGGGAAGGGTGAGTTTTCTACTATATACAGGGGAATATTGAGAGATGGATCTGTTGTGGTAGTAAAGTGCATTGCGAAAACAAGCTGCAAGCCTGATGAAACAGAGTTCTTGAAAGGGTTGAAGATATTGACTTCACTGAGGCATGAAAATCTGGTTCGGTTGAGAGGCTTTTGCTGTTCCAAGAGCCGTGGGGAGTGTTTTCTGGTCTATGATTTTGTCCCGAATGGGAGTTTGTTACGGTGCCTTGACGATGCTAAAGTTCTAGAATGGTCCACAAGAGTATCCATCATCCATGGCATTGCTAAAGGTATTGCTTATCTGCATGGAAAGAAGGGAAGCAAAGGCGGTCTACTTCACCAGAATTTATCAGCCGATACAGTGCTTCTAGATGCTGGGTACAATGCGGTTCTTGCATATTCGGGATTGCACAAGCTGCTGGCAGACGACGTCGTCTTCTCCACCCTCAAAGCTAGTGCAGCCATGGGATATCTGTCTCCCGAATACACGAAAACGGGTCGTCTAACCGAGAAGAGTGATGTGTATGCATTTGGAGTGATTGTTTTTCAACTTCTTAGTGGTAAACGTGACATCACTCAGTTAAGTCGCCAGACGGTACAAGTTGATGACAAACTTGAAGGGAAGTTCTCGGAATCAGAGGCCGAGAAACTCTGGGGAGTTGCTCTGCTTTGCACCCACGAATCTCCTCATCTCCGACCATATATGGAAGATGTGATTCAAGAACTCTGTGACTAA 1947 0.4479 MSLLLQVFLLLICASPSLPAKTSELEALMTIKESLDPQNRVLTSWTPHSDPCSSFPGHFEGVACNQEGLVVNISLQGKGLSGSIPAAISSLKSLTGLYLHFNSLSGILPKEISSLIHLTDLYLNVNSLSGDIPRQIANLSNLQVLQISYNEFSGGVPSELEKLKKLSVLSLQYNQLYGAIPASLGELESLTRLDLSFNQFFGPIPVSLGYAPKLQILDVRNNSLSGNIPKALERLKGGFQYMNNPGLCGTGFADLSPCRAVISSDPVRPEPYEPGNLSSEVLPTTVQPKDIKPSKPSNIGLVFAVIAVTFASTIFGLFIVLWYRHQKLKIGRTANTTSKMKEARKKISSPLISLEYSNGWDPLAKGQSGYSQEFLESLMFNVEDVERATQCFSELNLLGKGEFSTIYRGILRDGSVVVVKCIAKTSCKPDETEFLKGLKILTSLRHENLVRLRGFCCSKSRGECFLVYDFVPNGSLLRCLDDAKVLEWSTRVSIIHGIAKGIAYLHGKKGSKGGLLHQNLSADTVLLDAGYNAVLAYSGLHKLLADDVVFSTLKASAAMGYLSPEYTKTGRLTEKSDVYAFGVIVFQLLSGKRDITQLSRQTVQVDDKLEGKFSESEAEKLWGVALLCTHESPHLRPYMEDVIQELCD* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2680 648 SUPERFAMILY Protein kinase-like (PK-like) 369 646 IPR011009 -
Ahy16g2680 648 Gene3D Transferase(Phosphotransferase) domain 1 472 648 - -
Ahy16g2680 648 Pfam Leucine Rich Repeat 213 235 IPR001611 GO:0005515
Ahy16g2680 648 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 5 646 - -
Ahy16g2680 648 Gene3D Ribonuclease Inhibitor 138 255 IPR032675 -
Ahy16g2680 648 ProSitePatterns Protein kinases ATP-binding region signature. 398 424 IPR017441 GO:0005524
Ahy16g2680 648 Gene3D Phosphorylase Kinase; domain 1 364 470 - -
Ahy16g2680 648 Pfam Protein tyrosine and serine/threonine kinase 396 646 IPR001245 GO:0004672|GO:0006468
Ahy16g2680 648 Pfam Leucine rich repeat N-terminal domain 23 65 IPR013210 -
Ahy16g2680 648 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Ahy16g2680 648 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 646 - -
Ahy16g2680 648 SUPERFAMILY L domain-like 22 236 - -
Ahy16g2680 648 Gene3D Ribonuclease Inhibitor 23 137 IPR032675 -
Ahy16g2680 648 ProSiteProfiles Protein kinase domain profile. 392 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2680 Ahy-Chr16 138862227 138866654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2680 3 501 Miscellaneous Gene Families AT4G22730 46.226 2.54e-154 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Ahy16g2680 PK_Tyr_Ser-Thr 1.20E-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2680 - - adu:107495059 1241.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2680 16 138862227 138866654 Ahy6g2293 6 106035292 106039178 hybridization