Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2679 ATGCTCAAACCTGGAAAGAAGGGATATTCTTGGAACTTACAGCAGGAGTTTGAGTTAGAAGCAGAGGCTCATGCATTCTACAATGCATATGCCACGAGTGTTGGATTCATTGTACGTGTTAGTAAACTCTCTCGATCAAGGATCGATAATTCTGCTATTGGGCGGATTTTTGTCTGCAACAAAGAGGGATACAGGATGACTGACAAGCGTGAAAATGTTATACGGCAAAGGGCTGAGACAAGGGTTGGTTGCAAGGCAATGATAATGGTAAGGAAAATAAGATCTGGTAGCTGGGTTGTTACACGTTTTGTAAAGGAACACAGACACCCTCTTGTTGGTCCAGGAGGTGGCAGAAGGGATTTCATCTACGAACAATATCCGGTCAGTTCTCCTTCTTCCATTGCTATGCATTACTAA 417 0.4317 MLKPGKKGYSWNLQQEFELEAEAHAFYNAYATSVGFIVRVSKLSRSRIDNSAIGRIFVCNKEGYRMTDKRENVIRQRAETRVGCKAMIMVRKIRSGSWVVTRFVKEHRHPLVGPGGGRRDFIYEQYPVSSPSSIAMHY* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2679 138 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 127 - -
Ahy16g2679 138 Pfam FAR1 DNA-binding domain 26 112 IPR004330 -
Ahy16g2679 138 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 14 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2679 Ahy-Chr16 138805249 138805798 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy16g2679 FAR1 7.50E-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2679 - - ahf:112757683 283.493