Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2666 ATGGCAGAGTCAGGGAGGTATTGTTACAGGGACGTGGTTCCATTCTGTGCAATGGTTGCAGTTGAGTGTACCAACGTCGGTGTCAACGTTCTTTTCAAACAAGCTACTCTCAAGGGATTCAGTTACTACGCATTCATCGTTTATTCTTTCGCTCTCTCCACTCTTTTTCTTCTTCTCCCTCTCCCCTTCGTCTTCCGATGGTCAAGAGGGCTTCCTCCATTCAATGTTTCTCTCATCTTAAGAATTTTTCTCCTCGGTACCATTGGATTTGTAGCACAACTGAGTGGATACAAAGGACTTGAATACACTTCACCAACTCTCTTCTCTGCTCTTAGCAACCTTATTCCGGCTTTTACCTTCATCCTTGCGGTGTTTTTCAGGATGGAGAAGATTTCTCCAAAAAGTTGGAGCACTCAGGCCAAAATCGTGGGTTCTTTAGTGTCAATATTAGGTGCACTCATAGTTGTTCTCTACAAGGGTCCAACATTGATCTCAGCTTCATCATCACCACACCAGTCACCTCATGTTGATTTTCTAAAGGACTCATCACCGCAGCAAAATTGGGTTCTTGGAGGCTTCCTTATTGCCATTGAGTTTATTCTGGTTCCAATTTGGTATATTGTTCAGACCAATGTGATCAAAGACTATCCAGCCGAGATTATTGTGGTGTTCTTTTACAACTTGTGTGGGACTCTCATATCTGCACCTGTGTGCTTACTATTAGATGAATCAAACTTAAGTGGTTGGATTATAAAACCAGATATAACATTAGTCGCCATTTTGTACTCTGGATTCTTTTGCACAGGCCTAAGCAGTTTGGTCCATACATGGGGTATCCATATTAAAGGCCCTGTATACGTATCAAGTTTCAAGCCTGTGTCTATAGGCATAGCTGCTGCTTTCAGTGCTATATTTCTTGGTGATGCACTATATTTGGGCATTGTTGTTGGAGGAGTAATAATATCAATTGGGTTTTATGCTGTTTTATGGGGCAAAGCAAACGAAGAATTGAGTGAGTACATTGATTCAAGCCAAAGTCAACCCACATCAAAAGTCAACCAGCCTTTGTTATTATAG 1077 0.415 MAESGRYCYRDVVPFCAMVAVECTNVGVNVLFKQATLKGFSYYAFIVYSFALSTLFLLLPLPFVFRWSRGLPPFNVSLILRIFLLGTIGFVAQLSGYKGLEYTSPTLFSALSNLIPAFTFILAVFFRMEKISPKSWSTQAKIVGSLVSILGALIVVLYKGPTLISASSSPHQSPHVDFLKDSSPQQNWVLGGFLIAIEFILVPIWYIVQTNVIKDYPAEIIVVFFYNLCGTLISAPVCLLLDESNLSGWIIKPDITLVAILYSGFFCTGLSSLVHTWGIHIKGPVYVSSFKPVSIGIAAAFSAIFLGDALYLGIVVGGVIISIGFYAVLWGKANEELSEYIDSSQSQPTSKVNQPLLL* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2666 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 158 - -
Ahy16g2666 358 Pfam EamA-like transporter family 26 156 IPR000620 GO:0016020|GO:0016021
Ahy16g2666 358 PANTHER WAT1-RELATED PROTEIN 13 336 - -
Ahy16g2666 358 PANTHER WAT1-RELATED PROTEIN 13 336 IPR030184 GO:0016021|GO:0022857
Ahy16g2666 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 226 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2666 Ahy-Chr16 138547321 138553358 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2666 1 348 Nodulin-like Gene Family AT5G40240 54.366 3.07e-133 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2666 - - gmx:100805667 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2666 16 138547321 138553358 Ahy16g2666 16 138547321 138553358 ECH
Ahy15g1452 15 27058576 27062305 Ahy16g2666 16 138547321 138553358 ECH
Ahy16g2666 16 138547321 138553358 Ahy6g2279 6 105732880 105749465 hybridization