Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2656 ATGTATAGAATAATTTCGACGCCGGCGTCAAAGTTCCGCCAGTTCGGGCGACTCCGATCAAGAACTAGAAACACCGCCAACTCTGACGAGGAGAACGCATTCCAGATCCTATGGCGCTACCAGATCCTAGACCCGGACAGCGACATAGTTGCGTATTGGAACAGGGTGTTCCTCGTGGCAAGTCTCCTCGCGCTCTTCGTGGACCCTCTTTACTTCTTCCTCCCCACGGTGGGTGGCACCGCTTGCCTCAAGGCGGACCCCAGACTCAGCATCATCGTCACCATTATGCGAACCTTTGCCGATCTCTTCTACATCCTCCACATGGTCTTGAAGTTCCGCACCGCCTTCGTCGCCCCCAATTCTAGAGTCTTCGGCCGTGGTGACCTTGTCATGGACCCTCACGAAATCGCCATGCGCTACTTGAAGTCCGATTTTGTTATCGACCTTGCCGCCACTATTCCTTTGCCCCAGATTGTGATTTGGTTGGTGATTCCAGCAAGTAGTTCTTCAACCACGGATCATGCCAACAACACTCTTGCACTCTTTGTTCTAATTCAGTATATTCCCAGGCTCTTTCTTATCTTTCCTTTGAACCAGCGTATCACGAAAACCACTGGCGTTATTGCCAAAACCCCCTGGATTGCAGCCGCATACAATCTTCTTCTCTACATGCTAGCTAGTCATATTACAGGAGCAACGTGGTATCTGTCCTCAATTGGGAGACAATTCAACTGCTGGAAAGCAGAGTGCGAAAGAGAGAACAGATCAAAAACCATAACTTGCTTGCCTACTTTTCTTGATTGTAACAGTGTGAGTTCACCTGCAAGGCAACACTGGCTAAATGTCACTCAAGTTATTAACAGATGCGATCCCAAGGCCAAGCTCAACGTCAAGTATAAGTTTGGCATGTTTGCAGATGCTTTTCTCAATGATGTTGTTACTACTAACTTTGTGGAAAGATACTTCTATTGTCTTTGGTGGGGATTAAGAAATTTAAGCTCGTATGGACAGAATTTGGACACAACCACATACCTCCCAGAGACATTTTTCTGCATCTTCTTATGTCTTGCTGGATTAATTCTCTTTTGTCTTTTGATTGGAAACATGCAGACATACTTGCAATCAATGTCAGTTAGACTTGAAGAATGGAGGATTAGGAAGAATGACACTGAGCAATGGATGAGACATCGCCAATTGCCTCCAGACTTGCAGGAACGCGTTCGTCGCTTTGTTCAGTATAAATGGCTTGCCACCAGAGGAGTGAATGAAGAGTCCATACTACTTGATCTACCTTTGGATCTCCGTCGTGAAATTCAACACCACTTGTGCCTTTCTCTTGTTCGACGTGTCCCTTTCTTCTCACAAATGGATGACCAGCTCCTTGATGCAATCTGTGAACGGCTGGTGTCATCATTAAGCACAGAAGGCACATATATATTCCGAGAGGGAGATCCCGTGGACGAAATGTTGTTCATAATAAGAGGACAATTGGAGAGCTCCACAACCAATGGAGGAAGGTCTGGTTTCTACAATTCCATCACACTTAGGCCCGGCGACTTTTGCGGCGAGGAGCTGTTGACATGGGCCTTAATGCCAAATTCCACCCTCAACCTGCCTTCCTCTACTCGAACTGTAAAAGCTTTATCAGAAGTCGAGGCTTTTGCATTGGAAGCAGAGGATCTAAAGTTCGTGGCCAGTCAATTCAAGCGGCTTCATAGCAAGAAACTCCAGCACGCGTTTAGGTACTACTCCCAGCAATGGAGGACATGGGCTTCTTGTTTCATACAGGCGGCATGGCGAAAGTATCAGAAGAGGAAAGCGGCGAGGGAGTTGTCTTTGAAGGAGGGACACTTTTACATGTCTCTCCCTGAGAAGGACAGAGAAATGGATCAAAGTGGAGGATCATCATCATCTCCAGGGAATGTGAGAAAGGTTCAGAACATTAGTACAACCATTTTGGCTTCAAGGTTTGCGACTAATACAAGGAAAGCTAAGCTTCGTGGCAGTGATCCTGTGCCACAGTTGTTCAAGCCTGATGAACCTGACTTCTCTGTAGATCGTGAGGAAGTTTAG 2073 0.467 MYRIISTPASKFRQFGRLRSRTRNTANSDEENAFQILWRYQILDPDSDIVAYWNRVFLVASLLALFVDPLYFFLPTVGGTACLKADPRLSIIVTIMRTFADLFYILHMVLKFRTAFVAPNSRVFGRGDLVMDPHEIAMRYLKSDFVIDLAATIPLPQIVIWLVIPASSSSTTDHANNTLALFVLIQYIPRLFLIFPLNQRITKTTGVIAKTPWIAAAYNLLLYMLASHITGATWYLSSIGRQFNCWKAECERENRSKTITCLPTFLDCNSVSSPARQHWLNVTQVINRCDPKAKLNVKYKFGMFADAFLNDVVTTNFVERYFYCLWWGLRNLSSYGQNLDTTTYLPETFFCIFLCLAGLILFCLLIGNMQTYLQSMSVRLEEWRIRKNDTEQWMRHRQLPPDLQERVRRFVQYKWLATRGVNEESILLDLPLDLRREIQHHLCLSLVRRVPFFSQMDDQLLDAICERLVSSLSTEGTYIFREGDPVDEMLFIIRGQLESSTTNGGRSGFYNSITLRPGDFCGEELLTWALMPNSTLNLPSSTRTVKALSEVEAFALEAEDLKFVASQFKRLHSKKLQHAFRYYSQQWRTWASCFIQAAWRKYQKRKAARELSLKEGHFYMSLPEKDREMDQSGGSSSSPGNVRKVQNISTTILASRFATNTRKAKLRGSDPVPQLFKPDEPDFSVDREEV* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2656 690 Pfam Cyclic nucleotide-binding domain 475 563 IPR000595 -
Ahy16g2656 690 CDD CAP_ED 452 583 IPR000595 -
Ahy16g2656 690 Gene3D Helix hairpin bin 376 443 - -
Ahy16g2656 690 SMART cnmp_10 452 583 IPR000595 -
Ahy16g2656 690 Pfam Ion transport protein 52 379 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Ahy16g2656 690 SUPERFAMILY Voltage-gated potassium channels 44 374 - -
Ahy16g2656 690 Gene3D - 58 375 - -
Ahy16g2656 690 MobiDBLite consensus disorder prediction 663 690 - -
Ahy16g2656 690 Gene3D Jelly Rolls 450 570 IPR014710 -
Ahy16g2656 690 MobiDBLite consensus disorder prediction 626 647 - -
Ahy16g2656 690 MobiDBLite consensus disorder prediction 632 647 - -
Ahy16g2656 690 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 31 686 - -
Ahy16g2656 690 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 31 686 - -
Ahy16g2656 690 SUPERFAMILY cAMP-binding domain-like 382 577 IPR018490 -
Ahy16g2656 690 ProSiteProfiles cAMP/cGMP binding motif profile. 452 582 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2656 Ahy-Chr16 138385729 138389308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2656 20 690 Ion Channels AT5G14870 67.391 0.0 982
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2656 K05391 - gmx:100802812 1154.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2656 16 138385729 138389308 Ahy6g2272 6 105614230 105617502 hybridization