Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2647 ATGCAGCTCAATCACCTCTGCATTGTTCTTCCACCAAATTCCGGTGAAATGGATCAACCTGATCAGAAGCCTTTTCAACTACCAAAGAAACAAGTCAAGGCTCCTCATCATCATAGAGGTTGTGGGAGGCAAGTAGTTTCTTTGCTCCAAGATTCTTTGAGAAAGTTATACGGCTTAAAAGGGTGGACAATTTGCAAGCATGGAGTGAAGAAAGAGAAGTGTTCCGGCGGCGGCGCGTTTCACGACATGGACGGGGTGCAAGTTTCAGCCAAGATAGGGAGGGACAACCCCAGGATTTTCAGCTATGCAGAGCTCTTCATAGGGTCCAAAGGTTTCAGCGAAGAGCAAGTTCTTGGAAGTGGAGGGTTCGGAAAAGTTTTCAAGGCGGTTTTGCCGAGTGACGGAACTATTGTAGCCGTTAAATGCTGCTTGGCGGGGAAAGGGAAGCAATTTGAGAAGAGTTTTGAAGCAGAGTTAACGGCGGTTGCGGATCTTCGCCACAAGAATCTTGTGAGGCTTAGAGGATGGTGTGTTCATGAAGATCAGTTGCATCTTGTATATGACTACATGCCTAACAGCAGCCTTGACCGTATACTCTTCCGGAAGCTGGAGAATTCGAAGACTGAGCTTCTTGATTGGGAACACAGAGTGAAAATTGTGAAAGGTTTGGCGGCGGCATTGCATTATCTCCATGAACAATTGGAAACTCAAATCATTCATAGGGATGTGAAGACCAGCAACGTGATGCTTGATTCGCATTTCAATGCCAAACTAGGTGACTTTGGCATGGCAAGGTGGCTAGAACATGAGCTTGAGTTCAAGCCGAGAAAAATATCAACAAGAATTGACAATTTCCGTTTGGGAGACACGTCGAGAATCGGAGGAACGATTGGGTATCTTCCCCCTGAAAGCTTGCAGAAAGCAGGCAATGCTACTTCGAAATCCGATGTCTTCAGCTTCGGAATAGTTCTTCTAGAAGTGGTTTCTGGAAGGAGAGCCATAGACCTCGCTTATCCAGATGATGAAATTATTTTGCTTGATTGGATCAGAAGACTCTCCGATGTAGGGAAGCTTCTGGAAGCAGGGGATACACGGCTTCCAGATGGTTCCTACAAGCTTTCAGAGATGCAGCATCTCATTCACATTGCTCTTCTCTGCACTCTCCAAGAACCGCAGCTGCGTCCCAGCATGAAATGGACTGTGGAAGCACTTTCCGACGTGTCATGCAAGTTGCCAGCCCTCCCTTCGTTTCAATCTCACCCTCTATACATCTCTTTGTCATCCGCATCGGAGACTAGTCATAGCAGCGCAAGCGGCAACAGCTTTGCTACCGAGAATAACTATCACACAGCTGCAGGGGAAACCGTATACATAACCGCTGAAAACAGAAACAGTGAGATCATGTCTTCAAGGAGCACCAATCAACAGCGGCGATTTCCTGTGCTGGAGACGCCAAGGGAAATATCATTCAAGGAAATCGTTTCAGCTACAGACAATTTTTCAGATTCAAGGAGGGTGGCAGAGCTAGACTTTGGAACTGCTTATCATGGAATCCTACATGACAATTGCCATGTTTTGGTGAAACGCCTCGGGATGAAAACTTGCCCTGCGTTGCGTGACAGATTCTCCAACGAACTCCGGAATCTAGCAAGGCTGCGCCATAGGAATTTGGTGCAGCTTCGAGGATGGTGCACCGAGCAAGGCGAGATGCTTGTTGTGTATGACTACTCAGCTAGAAGAATTCTGAGTCAAATGCTTCTCCGTCATAACAATCATAGATCCGGAGATTCTTCTGTCCTTCAGTGGCATCACAGGTATTACATATCGAAAACGCTTGCTTGTGCAGTTCTGTATCTACATGAGGAATGGGATGAGCAAGTCATTCATAGAAACATTACCTCTTCAGCTATCATTCTTGAGCAAGATATGAATCCCAGACTTGGTTGTTTTGCTCTTGCTGAGTTTTTGACAAGGAATGAACACGGCCACCATGTAATCACAGACACTAGCAAATCGGCTCGCGGCATTTTTGGCTACATGTCACCAGAATACGTGGAATCCGGCGAAGCAACGCCCGCAGCTGATGTTTACAGTTTTGGAGTTGTGGTTCTTGAAGTTGTAAGTGGACAGATGGCAGTAGATTTTAGGCAGCCGGAGGTTCTGTTGGTGAAGAAAGTTCATGAATTCGAGATGCGAAAAAGGCCATTGAAGGAATTAGCAGACAAAAGACTCAATGGAGAGTACAATGAGAAAGAACTGCTGAGATTGATAAGACTGGGAATCGCATGCACCCGCTGTGACCCACAATTAAGGCCAAGCATGAGGCAAATTGTAAGCATCCTTGATGGCAAGGACAGCTTACTCGTCGAACTGAACAAAGAGAGCAGGGAAGATTGGAGAGAAAGAAATGCAATTTCTTTGTCACTCATTAGGAGAATCCAAGCTCTAGGAATACAGTAA 2460 0.4606 MQLNHLCIVLPPNSGEMDQPDQKPFQLPKKQVKAPHHHRGCGRQVVSLLQDSLRKLYGLKGWTICKHGVKKEKCSGGGAFHDMDGVQVSAKIGRDNPRIFSYAELFIGSKGFSEEQVLGSGGFGKVFKAVLPSDGTIVAVKCCLAGKGKQFEKSFEAELTAVADLRHKNLVRLRGWCVHEDQLHLVYDYMPNSSLDRILFRKLENSKTELLDWEHRVKIVKGLAAALHYLHEQLETQIIHRDVKTSNVMLDSHFNAKLGDFGMARWLEHELEFKPRKISTRIDNFRLGDTSRIGGTIGYLPPESLQKAGNATSKSDVFSFGIVLLEVVSGRRAIDLAYPDDEIILLDWIRRLSDVGKLLEAGDTRLPDGSYKLSEMQHLIHIALLCTLQEPQLRPSMKWTVEALSDVSCKLPALPSFQSHPLYISLSSASETSHSSASGNSFATENNYHTAAGETVYITAENRNSEIMSSRSTNQQRRFPVLETPREISFKEIVSATDNFSDSRRVAELDFGTAYHGILHDNCHVLVKRLGMKTCPALRDRFSNELRNLARLRHRNLVQLRGWCTEQGEMLVVYDYSARRILSQMLLRHNNHRSGDSSVLQWHHRYYISKTLACAVLYLHEEWDEQVIHRNITSSAIILEQDMNPRLGCFALAEFLTRNEHGHHVITDTSKSARGIFGYMSPEYVESGEATPAADVYSFGVVVLEVVSGQMAVDFRQPEVLLVKKVHEFEMRKRPLKELADKRLNGEYNEKELLRLIRLGIACTRCDPQLRPSMRQIVSILDGKDSLLVELNKESREDWRERNAISLSLIRRIQALGIQ* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2647 819 PANTHER RECEPTOR LIKE PROTEIN KINASE S.2 1 818 - -
Ahy16g2647 819 PANTHER - 1 818 - -
Ahy16g2647 819 ProSiteProfiles Protein kinase domain profile. 112 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g2647 819 SMART serkin_6 112 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g2647 819 Pfam Protein kinase domain 113 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g2647 819 Gene3D Phosphorylase Kinase; domain 1 459 576 - -
Ahy16g2647 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Ahy16g2647 819 CDD STKc_IRAK 511 783 - -
Ahy16g2647 819 SUPERFAMILY Protein kinase-like (PK-like) 476 783 IPR011009 -
Ahy16g2647 819 ProSitePatterns Protein kinases ATP-binding region signature. 118 147 IPR017441 GO:0005524
Ahy16g2647 819 SUPERFAMILY Protein kinase-like (PK-like) 96 434 IPR011009 -
Ahy16g2647 819 Gene3D Phosphorylase Kinase; domain 1 84 189 - -
Ahy16g2647 819 Gene3D Transferase(Phosphotransferase) domain 1 582 802 - -
Ahy16g2647 819 Gene3D Transferase(Phosphotransferase) domain 1 190 410 - -
Ahy16g2647 819 Pfam Protein tyrosine and serine/threonine kinase 506 781 IPR001245 GO:0004672|GO:0006468
Ahy16g2647 819 ProSiteProfiles Protein kinase domain profile. 500 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2647 Ahy-Chr16 138220395 138223285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2647 486 784 Receptor kinase-like Gene Family AT5G55830 36.634 2.04e-52 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ahy16g2647 Pkinase 3.30E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2647 - - vun:114184452 1275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2647 16 138220395 138223285 Ahy6g2266 6 105501070 105503948 hybridization