Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2643 ATGTCCTTCAATCAATCAAAATCCGACAAGAGTGACGCTGTGTACCGAAAATCCGGGCGATCTGCCGGCTTCAATCAGCAGCGAGGCTCCTCCGGTGGTGCATACGGTAGGGGCGGCGGTGCCGCACCTTCTCCGTCACTATCCTCTAACCGCAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGGCAATCTAGGGTAAACCCTTCTGCACTAACCGAGTCTAATAGTACTTATGCAACCCGGACTGCACCAAATGGTAGCCACGTACAGCCTCAATTTCATGGAGGATCTGATGCACCCGTTACCAATACCACTGTCAAGTCATCAGAATCCTCAAATGCTCAGAGGACAACCAGAGCTGTTCCGAAAGCTCCTACTTCTCAACCTCCCACCTTGAGCTCTGATTCAGCTGCTTTGACAACCCCTGCTAAGGGAGATGCATCCAAGGCATTTCCTGTCCAATTCGGATCTATTAGTCCAGGTTTTATGAATGGAATGGCAATTCCTGCTCGCACAAGCTCAGCTCCACCCAATTTAGATGAGCAGAAGCGTGATCAGGCCCGCTATGATTCTTTTAAACCTGCTCCAGCACCAGCACCAACACCAACACCAGCACCTCCCATTCCAAAGCAGCACCCTGTGAAGAAGGATACAGGTATTACTGATCAATCTCATGCTGGGACTAGGGCAAAGAAAGATATGCAGGTGTCAGCATTGCCTCCAGGAAGCCAGATGCAAAAGCCTTCTGTTGTTCCTTTAAGTGGAATTTCAATGCCAATGACGTATCATCAGCCCCAGGCATCTGTACAGTTTGGTGGTCCGAATCCACAGATTCAATCTCAGGGTATGCCAACAGCATCTCATCAGATGCCTTTACCTATGCCTTTGCCAGTTGGAAATGCTCCACAAGTGCAGCAGCAGGTCTTTGTTCCAGGCCTTCAACCTCATCAGATGCATCAAGGACTCATTCATCAGAGCCAAAACATGAGTTTTACTCCTCAAATGGTCCCTCAATTGCCCCATCAGTTAGGTAGCATGGGCATTAGCATTGGCCCACAATATTCCCCACAGCAAGGAGGAAAATTTGCTCCTCGTAAAACTACTCCTGTCAAGATAACTCATCCTGAGACCCATGAGGAACTTAGGCTTGATAAAAGGGCAGACACGTATTCAGATGGTGGGTCATCCGGTGCTAAATCTTACTCTAGTGTGTCCTCTCAATCTCAACCTGCAATGCCAGTTTCTCATCCTATTAATTACTATCCATCCCATGCTCCCTTCTATCAACCCTCTAGTAGTAGTCAGATAACACCAAATTCTCAGCCACTGAGATTTAATTATGCAGTGAGCCAGGGTCCCCAAAATGTTAGTTTCATGAATTCATCTTCTCATAGTTCACTACCTGTTAATAAAGTTGTCAATCATATCCCTGGCATTGTTGAATCATCAAATCCAAAATTTTCCCGGGATGTGCATAATGCTATCTCACAATCTTCAACAGGAGCAACTTCTGTGTCTGTTAAACTTAGTAGTGGGTCTGGTGTTGTGGACTCATCAGTTGCCAATTCCAATATTTCTGCTGCCCAAAAGAGTGACCCTGCCAGAGCTTCAGTAGTGTCTGGTAATGCTAGCTCCTCTTTGCCCCAAAAAGGTTCTGAAACCTTCTCTGAGGTTTCGTTGGAACAGTCTAAGTTATCCGGTGATTCTTCAGTTTTGAGCTCATTGCCAAAACAATCTACTGCATATACTAAGGTTACAGCTGCTCCCATGAAGCCTTCATCTGCTATGAATGAGGAGGCTGTTTTAGTTGTGTCTAATAATGAAGAAAAGGGGAAGGAATCTCTGAGTAGGTCAAATTCTTTGAAAGATAATAAGAAGGTACAGAAGGAAGGCCAATTACAGCATCCAGTTGTACAGTCTCCTACTGTTTCATATGTGTCTTCCCAAGCTGTTGAGAGATCTACTGGGGATTCTGAAACTGTAGTAACTAAAACAAACCATTCTGCAGCTGTTATCAGTGAAGATATCACAACAACGACTGAAGATACATTACCAACTCCCCCTTTGAGCATGCCTCATGCTGAAGCAAAAAGAAATGGTGCTGTAGAACCTTCTACTCATGTTTCAGCTGAAGGACCTGTTGCTCAAGCTGCGGATAGTTTGAAAAAGAATGATGAGCTAGATGAATTTTCACAACTGGATAAACTTTCAAAGAATAAAGATTCAGAAATGGGTGAAAATACTGAAATATCATCTATTCAAGGATGTAAACGGGAGCTGGATGAATCTACAAGCTGTATTCCAGAATGTGTAAACAAAAACCCTACTGCATTGGGTTCTTCTACAGATGTTTGTTTGAGTAGAGATATTGCAGTTAGTAGTGAAGCTGTTGTAAGTTCTCCGACATTAGACCAGAATTCATCTGATATTCCAGAAACAACATCAGAACATTTCGATGATGGTTTAGAGAATGCTGGCAGTGTAGTTTCTCTTCCAGCACCAGATACTAATGATAGATCAATTTTAGATCAAAATAAGGTAAAAACTACATCTAAGGCGAAAAAGAAAAGAAAAGAGATTCTTCAGAAAGCAGATGCTGCTGGGTCAACCTCTGATCTTTATAATGCATACAAGGGACCTGAAGAGAAGAAAGATGCTGTTGTTAGCTCAGAAGAAGTGGCAAGAGTTTCTACTTCTGGAAGTTTGGAGCAGTTGTCTACTAATGCTGCTCAGCCAGATGCTATAGCAGGTGAGCAATGTAGGGAGAATAAGGCTGAACTTGATGATTGGGAGGATGCTGCTGACATGTCTTCACCAAAACTTGAAGTTTCAGATCAAACTGAACAGGTTATTGATGGATCTGTAGTCATTGTGAAGAGGTACTCTCGAGATTTCCTTTTGAAGTTTGCAGAGCAGTGCACCGATCTTCCCGAAGGATTTGAAATCACAGCAGATATCGCGGAGGCTTTGATCAGTGCCAACATTAGTAGTTCACGTGATCCGCATCCTTCTCCGGGAAGGATTATAGATAGGCCTAGTGGGATGTCTCGGATGGATCGCCGTGGTGGTGGTATTACTGAGGAAGACAAGTGGAGTAAAGTTTCCAATGCTTTTCATTCTGGTATGCGTTTGGATAGTATTGGAGGTAATGCAGGATTTCGCCCAGTTCAAGGAGGCAATTTTGGTGTATTAAGGAATCCTCGCTCGCCTCTGCCATATGCTGGAGCTGGAGGGATTCTTTCTGGGCCAATGCAATCCATGGGAAATCTGGGAGGAATGCCAAGAAACAGCTGTGACAGTGAAAGGTGGCAGCGTGCTTCAAGCTTCCAGCAAAGGGTTTTGGTTCCTTCTCCTCCTCAAAGTCCTTTGCAGATGATGCACAAAGCTGAAAAGAAGTATGAAATCGGTAAAGTGACAGATGTGGAAGAGGCCAAGCAGAGGCAATTGAAAGCTATATTAAATAAGTTGACTCCTCAGAATTTTGAGAAGCTTTTTGAGCAGGTAAAAGCAGTTAACATTGACAATGCAGTAACTCTCACTGGTGTCATCTCACAAATATTTGAGAAGGCTTTGATGGAACCTACCTTCTGTGAAATGTATGCCAATTTCTGTTCACATTTGGCTGCTGAGTTGCCTGATTTTAGTGAAGACAATGAGAAGATAACTTTTAAGAGATTATTGCTGAACAAGTGTCAGGAAGAATTTGAGAGGGGTGAAAGAGAGCAGGAAGAAGCAAACAAGGCGGATGAAGGTGAGGTCAAGCAATCTAATGAACAAAGGGAAGAGAAAAGGACAAAGGCAAGAAGACGCATGCTGGGTAATATCAGATTGATAGGAGAACTGTATAAGAAGAAAATGTTAACAGAGAGGATTATGCATGAGTGCATCAAGAAGTTATTAGGTCAGCATCAGGATCCGGATGAAGAAGATATTGAGGCTTTGTGCAAGCTCATGAGTACGATTGGGGAGATGATTGACCATCCCAAAGCCAAGGTTCATATAGATGTATATTTTGAAAGGATGAAATCATTATCAAACAACATGAATTTATCTTCGAGGGTGAGGTTCATGTTGAAAGATGCCATTGATTTAAGAAAGAACAAATGGCAACAAAGGAGGAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTGCACAGAGATGCTACCCAAGAGAGGCAGGCCCAAACCGGTAGGTTGGGTCGTGGTCTGGGCAATAATCCAGCAAGAAAAAACCCTGTAGATTTTGGTCTGAGAGGGGCATCTATGTTACCTTCACCTGTTGCTCAGATGGGTGGATTACGGGGGCTGCCTTCTCAAATTCGCGGATATGGTCCACAGGATGCTCGAATGGAAGACAGGCATGAGGCTAGGATTCTCTCAGTTCCAATGAGTCAAAGATTGGGTGATGATTCAATAACCTTGGGACCCCAAGGAGGTCTTGCTAGAGGAATGTCCTTAAGAGGTTCAACTGCAGTTTCAAGTTCAACCAGTTTTAATGGTTATACTAATTTAGCAGAGGGATCACCATACAGTTCTAGGGAGGGCCTAGCATCAAGATATATTCCAGATAGATTTGCTGTGCGAACAGCTGATCAATCAAGTGCCCAAGAGCGAAATATCAATTACAGTAACAGGGACTCGAGAAATGCAGATGGGAATTTCGACATGCCTGTTGTAACTTCGCCTTCTCAACTTCAAGGGACAGCAGTCTCCCAGATTCCTTCTTCAGAAAGGGTTCCGGAGGAACGGTTGCTAGACATGTCAATGGCAGCAATAAGAGAATATTATAGTGCTAGGGATGAGAAGGAAGTTGTTTTGTGTGTGAAAGATTTGAACTCTCCAAGCTTCCATCCTTCCATGGTGTCTATTTGGGTCACAGACTCTTTCGAGAGAAAGAACACAGAAAGAGATCTTCTGGCTCAGCTACTAGTCAACCTTGTGAAGTCTCAGGATGGTATCTTGAGTCAAGCCCAGCTCATCAAAGGGTTTGAATCTGTTCTCAGTACTTTGGAAGATTCAGTTAACGATGCCCCCAAAGCACCAGAGTTTCTTGGCCGCATTTTTGCCAAAGCTGTAACAGAGCATGTAGTCTCTTTGAAAGAGATTGGGCAGTTAATACATGATGGTGGTGACGAACCTGGCAGTCTCTTAGAAGCAGGACTCGCAGCTGATGTTCTTGGAAATACCTTGGAGGTCATAAAAATGGAGAAAGGTGATGACGTTTTAAGTGAGATCCGGACAAGCTCCAACTTGCGGTTGGAGACTTTCAGGCCACCTGAACCTTTGAAATCAAGGAAGTTAGAGAGTTTTATTTAG 5319 0.4371 MSFNQSKSDKSDAVYRKSGRSAGFNQQRGSSGGAYGRGGGAAPSPSLSSNRSFNKKSNNAQGGQSRVNPSALTESNSTYATRTAPNGSHVQPQFHGGSDAPVTNTTVKSSESSNAQRTTRAVPKAPTSQPPTLSSDSAALTTPAKGDASKAFPVQFGSISPGFMNGMAIPARTSSAPPNLDEQKRDQARYDSFKPAPAPAPTPTPAPPIPKQHPVKKDTGITDQSHAGTRAKKDMQVSALPPGSQMQKPSVVPLSGISMPMTYHQPQASVQFGGPNPQIQSQGMPTASHQMPLPMPLPVGNAPQVQQQVFVPGLQPHQMHQGLIHQSQNMSFTPQMVPQLPHQLGSMGISIGPQYSPQQGGKFAPRKTTPVKITHPETHEELRLDKRADTYSDGGSSGAKSYSSVSSQSQPAMPVSHPINYYPSHAPFYQPSSSSQITPNSQPLRFNYAVSQGPQNVSFMNSSSHSSLPVNKVVNHIPGIVESSNPKFSRDVHNAISQSSTGATSVSVKLSSGSGVVDSSVANSNISAAQKSDPARASVVSGNASSSLPQKGSETFSEVSLEQSKLSGDSSVLSSLPKQSTAYTKVTAAPMKPSSAMNEEAVLVVSNNEEKGKESLSRSNSLKDNKKVQKEGQLQHPVVQSPTVSYVSSQAVERSTGDSETVVTKTNHSAAVISEDITTTTEDTLPTPPLSMPHAEAKRNGAVEPSTHVSAEGPVAQAADSLKKNDELDEFSQLDKLSKNKDSEMGENTEISSIQGCKRELDESTSCIPECVNKNPTALGSSTDVCLSRDIAVSSEAVVSSPTLDQNSSDIPETTSEHFDDGLENAGSVVSLPAPDTNDRSILDQNKVKTTSKAKKKRKEILQKADAAGSTSDLYNAYKGPEEKKDAVVSSEEVARVSTSGSLEQLSTNAAQPDAIAGEQCRENKAELDDWEDAADMSSPKLEVSDQTEQVIDGSVVIVKRYSRDFLLKFAEQCTDLPEGFEITADIAEALISANISSSRDPHPSPGRIIDRPSGMSRMDRRGGGITEEDKWSKVSNAFHSGMRLDSIGGNAGFRPVQGGNFGVLRNPRSPLPYAGAGGILSGPMQSMGNLGGMPRNSCDSERWQRASSFQQRVLVPSPPQSPLQMMHKAEKKYEIGKVTDVEEAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCSHLAAELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKQSNEQREEKRTKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQHQDPDEEDIEALCKLMSTIGEMIDHPKAKVHIDVYFERMKSLSNNMNLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDATQERQAQTGRLGRGLGNNPARKNPVDFGLRGASMLPSPVAQMGGLRGLPSQIRGYGPQDARMEDRHEARILSVPMSQRLGDDSITLGPQGGLARGMSLRGSTAVSSSTSFNGYTNLAEGSPYSSREGLASRYIPDRFAVRTADQSSAQERNINYSNRDSRNADGNFDMPVVTSPSQLQGTAVSQIPSSERVPEERLLDMSMAAIREYYSARDEKEVVLCVKDLNSPSFHPSMVSIWVTDSFERKNTERDLLAQLLVNLVKSQDGILSQAQLIKGFESVLSTLEDSVNDAPKAPEFLGRIFAKAVTEHVVSLKEIGQLIHDGGDEPGSLLEAGLAADVLGNTLEVIKMEKGDDVLSEIRTSSNLRLETFRPPEPLKSRKLESFI* 1773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2643 1772 MobiDBLite consensus disorder prediction 353 418 - -
Ahy16g2643 1772 MobiDBLite consensus disorder prediction 798 813 - -
Ahy16g2643 1772 Gene3D - 1577 1772 - -
Ahy16g2643 1772 MobiDBLite consensus disorder prediction 1372 1393 - -
Ahy16g2643 1772 MobiDBLite consensus disorder prediction 611 631 - -
Ahy16g2643 1772 Coils Coil 1229 1249 - -
Ahy16g2643 1772 MobiDBLite consensus disorder prediction 1372 1412 - -
Ahy16g2643 1772 MobiDBLite consensus disorder prediction 527 562 - -
Ahy16g2643 1772 MobiDBLite consensus disorder prediction 1239 1267 - -
Ahy16g2643 1772 MobiDBLite consensus disorder prediction 196 212 - -
Ahy16g2643 1772 SMART if4_15 1147 1369 IPR003890 GO:0003723|GO:0005515
Ahy16g2643 1772 Pfam MIF4G domain 1147 1369 IPR003890 GO:0003723|GO:0005515
Ahy16g2643 1772 MobiDBLite consensus disorder prediction 394 415 - -
Ahy16g2643 1772 MobiDBLite consensus disorder prediction 43 142 - -
Ahy16g2643 1772 MobiDBLite consensus disorder prediction 798 820 - -
Ahy16g2643 1772 MobiDBLite consensus disorder prediction 372 390 - -
Ahy16g2643 1772 MobiDBLite consensus disorder prediction 1530 1553 - -
Ahy16g2643 1772 ProSiteProfiles MI domain profile. 1584 1708 IPR003891 -
Ahy16g2643 1772 Pfam MA3 domain 1592 1697 IPR003891 -
Ahy16g2643 1772 SUPERFAMILY ARM repeat 1143 1371 IPR016024 -
Ahy16g2643 1772 SMART ma3_7 1585 1699 IPR003891 -
Ahy16g2643 1772 MobiDBLite consensus disorder prediction 1493 1510 - -
Ahy16g2643 1772 Gene3D - 1147 1382 - -
Ahy16g2643 1772 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 121 1762 - -
Ahy16g2643 1772 MobiDBLite consensus disorder prediction 1 250 - -
Ahy16g2643 1772 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 121 1762 IPR045208 GO:0003743
Ahy16g2643 1772 MobiDBLite consensus disorder prediction 997 1026 - -
Ahy16g2643 1772 MobiDBLite consensus disorder prediction 607 646 - -
Ahy16g2643 1772 MobiDBLite consensus disorder prediction 1493 1514 - -
Ahy16g2643 1772 SUPERFAMILY ARM repeat 1579 1762 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2643 Ahy-Chr16 138161813 138171157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2643 1 1771 Eukaryotic Initiation Factors Gene Family AT3G60240 45.405 0.0 1235