Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2635 ATGGCTTCTTCCGTGCCAACACACATGAAAGCATGGATGTACTCAGAATATGGCAAGAGTTCACAAGTTCTTAAGTTTGAAGGCAGTGTCCCTGTGCCTGACGTGAAGGATGATCAGGTTCTCATCAAGGTTGCTGCTGTGTCCCTCAATCCCATTGATTATAAGCGAATGGAAAAAGCTTTCGCATCCACTGACTCTCCTTTACCCACTATTCCAGGGTATGATGTTGCCGGTGTGGTGGTTAAAGTGGGGAATGAGGTGACCAAATTTAAGGTTGGGGATGAAGTTTATGGTGATATCAATGAGAATGCTTTGGATCATCCAAAGGTGAATGGGTCTTTGGCAGAGTATACTGCAGCAGAAGAAAAATTGTTGGCTCACAAGCCGCAGAACCTGAGCTTTGGTGAGGCTGCTAGCCTTCCTCTAACCATTGAGACTGCTTATGAAGGCCTCGAACGAGCCGGGTTTTCCGCCGGAAAGTCTATCCTTGTTCTGGGAGGTGCCGGTGGAGTTGGAACACATGTTATTCAGCTTGCCAAGCATTTCTATGGTGCATCTAAGATAGCAGCAACTGCTAGCACTAAGAAACTGCAAGTTTTGAGAAACTTGGGAGCTGACTTGCCAATCGATTATACAAAGGATAATTTTGAAGACCTTCCTGAAAAATTCGACGTGGTGTATGATGCAGTAGGAGAAACAGAGAGGGCATTCAAGGCTGTAAAAGAAGGAGGCAAAGTTGTGACAATAGTACCACCCGGATTTTCTCCAGCAATATTTTTCATACTTAAATCTGATGGCACAGTCTTAGAGAAACTAAGACCTCATTTGGAAAGCTGCAAAATCAAGCCAATAATTGATCCCAAGAGTCCCTTTCCGTTTTCCCAAACCGTTGAAGCGTTTTCCTTTCTTGAAACAAACAGAGCCACGGGCAAAGTAGTCATCGATCCCATACCATGA 957 0.4462 MASSVPTHMKAWMYSEYGKSSQVLKFEGSVPVPDVKDDQVLIKVAAVSLNPIDYKRMEKAFASTDSPLPTIPGYDVAGVVVKVGNEVTKFKVGDEVYGDINENALDHPKVNGSLAEYTAAEEKLLAHKPQNLSFGEAASLPLTIETAYEGLERAGFSAGKSILVLGGAGGVGTHVIQLAKHFYGASKIAATASTKKLQVLRNLGADLPIDYTKDNFEDLPEKFDVVYDAVGETERAFKAVKEGGKVVTIVPPGFSPAIFFILKSDGTVLEKLRPHLESCKIKPIIDPKSPFPFSQTVEAFSFLETNRATGKVVIDPIP* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2635 318 Gene3D - 16 314 - -
Ahy16g2635 318 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 2 318 IPR044626 GO:0016628
Ahy16g2635 318 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 132 255 IPR036291 -
Ahy16g2635 318 SMART PKS_ER_names_mod 19 314 IPR020843 GO:0016491
Ahy16g2635 318 Gene3D - 151 265 - -
Ahy16g2635 318 SUPERFAMILY GroES-like 5 166 IPR011032 -
Ahy16g2635 318 Pfam Alcohol dehydrogenase GroES-like domain 38 100 IPR013154 -
Ahy16g2635 318 CDD MDR_like_2 9 314 - -
Ahy16g2635 318 Pfam Zinc-binding dehydrogenase 203 314 - -
Ahy16g2635 318 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 159 180 IPR002364 GO:0008270|GO:0016491
Ahy16g2635 318 PANTHER CYTOSOLIC ALKENAL/ONE OXIDOREDUCTASE 2 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2635 Ahy-Chr16 137996991 138000594 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2635 65 228 Monolignol Biosynthesis Gene Families AT1G72680 26.562 4.08e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2635 K18980 - gmx:100817947 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2635 16 137996991 138000594 Ahy6g2259 6 105351461 105355356 hybridization