Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2603 ATGCATCAATCAAGTTCCCTCCTTTTCATTCTTTTCATTCTTCTCTCAACTCATATAAATTCAAACCACAATCCAACGTTTTCACTTAACAAACAACAATTTATGAAGACATCATCATTCACTGACCTCCTTTCAAACAACTATAGTAACATAAACATGAACATGGATGATTTTGGTGATGCTAATGTTATTCAAAACCAAGATTCTGTTCCAAAATTTAAGTCTGTTACACCACCTTCACTGCCACTTGAGAACTCACAAACTTCTTCTTACTTTCCTTTTACATCATCAACTTTTAGCCCAACTGAGTTTTTGAACTCATCTTTGTTCCTTTCTTCTCCTAATATTTTTGCATCTCCTACTATTGAGGCTTTTGCTGGCCACAGCTTCAACAACAAGGAAGATGAGAAGAACTTCTCTGAATTCTCTTTCCAAACACAGACTAAGACATCTTCTCCCTCTCAAGCAGAACCACTTAAGACACAAGACATGTGGAAATTCACAGAACCTATAAACCAAGCTGAATTTTCATCTCAGACAAAATCTGAATATCCATCAACACAGAGCTTCTCCTCAGAAATGGTAGCAACAAAACCCGAATTACAAAGCAATTCGGTGCCTGAGTCCGGTTCTTTCAACTATGCTAACACGTCTCAGTCCATTAAAGAACAAAGGAGATCAGAAGATGGTTACAATTGGAGGAAATATGGACAGAAACAAGTGAAAGGGAGTGAGAATCCACGGAGCTATTACAAGTGCACACATCCGAATTGCGCAATGAAGAAGAAAGTTGAGAGGTCTTTGGAGGGACAAATTACTGAGATAGTGTATAAGGGAACTCATAATCATCCTAAGCCACAGAGTACTAGAAGAAGTTCAAGCTCTCAACAAATTATTCATCAGCAGCCTTCTTCATCCTGCACTAACTCAGGAATCTCGGATCAGTCAGTGGTGACACTAGGCAATCCTCAATTTGATCGTGTGTCGATGCAAGAAGATTCTTCAGCTTCTATGGGAGAGGAAGAATTTGAACAAACTTCTCCAACAAGTTACTCTGGTGGAGATGCAGATGAACTTGGACCAGATGCCAAAAGATGGAAGGGGGAGAATGAACATGATGGTCATTCAGCCTATGGAAGTAGAACTGTTAGGGAACCTAGAGTTGTAGTTCAAACTACAAGCGAGATCGATATTCTTGATGATGGCTACAGATGGAGGAAATATGGACAGAAAGTAGTTAAAGGAAATCCAAATGCAAGGAGTTATTACAAATGCACAGCCCCTGGTTGTTCAGTGAGGAAACATGTTGAGCGAGCCGCGACTGATATAAAATCAGTGATCACAACTTATGAAGGGAAACACAACCATGACGTGCCTGCAGCACGCGGCAGCGCAGGTTACAACATGAACAGAAACTCTCTAAATAGAAACAATAGCAATGCACCGGCAGCACCAATAAGGCCTGCGGCCGTGAATGGTTATTCTAGCGCGCCGAATTTCACGAATTCACTTTACAATCCTAGGCTTCCGGCCACCGGAACTCAAGAATCATCTTCCCTAGACATGCTGCAAGGCTCTGGACTTTTTGGCTACACGTCTCTTGGAAGATCAATGGGTTCATATGGAAACAATTCGCAACTTTCGGATGGTGTATACATCAAGGCCAAGGATGAAAGGAAGGATGACTCATTCCTTGAGTCATTTCTTTCGAAGAACTAA 1719 0.4107 MHQSSSLLFILFILLSTHINSNHNPTFSLNKQQFMKTSSFTDLLSNNYSNINMNMDDFGDANVIQNQDSVPKFKSVTPPSLPLENSQTSSYFPFTSSTFSPTEFLNSSLFLSSPNIFASPTIEAFAGHSFNNKEDEKNFSEFSFQTQTKTSSPSQAEPLKTQDMWKFTEPINQAEFSSQTKSEYPSTQSFSSEMVATKPELQSNSVPESGSFNYANTSQSIKEQRRSEDGYNWRKYGQKQVKGSENPRSYYKCTHPNCAMKKKVERSLEGQITEIVYKGTHNHPKPQSTRRSSSSQQIIHQQPSSSCTNSGISDQSVVTLGNPQFDRVSMQEDSSASMGEEEFEQTSPTSYSGGDADELGPDAKRWKGENEHDGHSAYGSRTVREPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNARSYYKCTAPGCSVRKHVERAATDIKSVITTYEGKHNHDVPAARGSAGYNMNRNSLNRNNSNAPAAPIRPAAVNGYSSAPNFTNSLYNPRLPATGTQESSSLDMLQGSGLFGYTSLGRSMGSYGNNSQLSDGVYIKAKDERKDDSFLESFLSKN* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2603 572 ProSiteProfiles WRKY domain profile. 394 459 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy16g2603 572 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 334 570 IPR044810 GO:0003700
Ahy16g2603 572 SMART WRKY_cls 399 458 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy16g2603 572 SMART WRKY_cls 227 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy16g2603 572 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 70 329 - -
Ahy16g2603 572 MobiDBLite consensus disorder prediction 277 317 - -
Ahy16g2603 572 MobiDBLite consensus disorder prediction 358 378 - -
Ahy16g2603 572 MobiDBLite consensus disorder prediction 282 317 - -
Ahy16g2603 572 MobiDBLite consensus disorder prediction 329 378 - -
Ahy16g2603 572 ProSiteProfiles WRKY domain profile. 222 286 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy16g2603 572 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 334 570 - -
Ahy16g2603 572 Gene3D WRKY domain 384 460 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy16g2603 572 Gene3D WRKY domain 213 287 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy16g2603 572 SUPERFAMILY WRKY DNA-binding domain 223 286 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy16g2603 572 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 70 329 IPR044810 GO:0003700
Ahy16g2603 572 MobiDBLite consensus disorder prediction 176 248 - -
Ahy16g2603 572 MobiDBLite consensus disorder prediction 176 221 - -
Ahy16g2603 572 MobiDBLite consensus disorder prediction 329 353 - -
Ahy16g2603 572 SUPERFAMILY WRKY DNA-binding domain 391 459 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy16g2603 572 Pfam WRKY DNA -binding domain 400 456 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy16g2603 572 Pfam WRKY DNA -binding domain 228 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2603 Ahy-Chr16 136989601 136992622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2603 96 569 WRKY Transcription Factor Family AT2G38470 47.189 8.63e-116 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy16g2603 WRKY 1.40E-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2603 K13424 - gmx:100792833 677.167