Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2590 ATGGCTAGGAGCTGGCTTATTGACATAGGTGGATTTGCAAAGAAAGTGAAAAGCACTAATTTATCTCCAGCTGATCAAATCAAAGATTGTGGGGCATATCGTGATTGTCCAAACTGCCATTACCGTATTGATAACCGTGATGTTTCTACTGAGTGGCCTGGCTTTCCTGTTGGTGTGAAGTTTGATCCTTCTGATGTAGAACTCCTAGAACATTTAGCAGGAAAATGTGGCATTGGAAATGCTCAGCTGCATATGTTTATTAATGAGTTCATTCCAACAATAGAAGAAGAAGAAGGTATTTGCTATACACATCCAGAAAATCTTCCAGGTGTCAAGAAAGATGGGAGCAGTGCCCATTTCTTTCATAGAACAACCAATGCCTATACTACTGGTCAACGGAAGCGTCGAAAGATTCATCATCAATGTTTGACTGAAGAGCATGTACGGTGGCATAAGACTGGTAAGACAAAAGCTATATTGGAGGATGGAGTGCATAAGGGCTTTAAGAAGATCATGGTTCTTTATATAAGACCTAAGAAAGGGTCCAAACCTGATAAAACGAATTGGGTGATGCACCAATATCATTTAGGAACTGATGAAGAGGAGAAGAACGGTGAATATGTGGTTTCAAAGATTTTTCAGAAGCAAACTGAGAAAAATGAGGAGAATCCAGCGGTCGAAGATTCTGACCAGAATGAGAAAAATGAGAATCGATTGGCTGATGATTCCAACTGTATAGCATCCCGAACCAGTCCTAGAACTCCGAAACCAAATCCCCCAAATCCACCTAGAGCTGGAAATTTTGTTGACAATGATGATAATATTGACGAAACTGAACTTCCATTCACTCAGGATGTGAAATGTGTCCCACAATGTGATGTTCTGGATCAGAACAATGCTGGTGACCCTGCATGGCTGGCAGGTGAATCGCAGGCTGTGGAAAACTTCGACTTTGATGGCTTGGATGACATCTTGTTCTGCAATGAAATATTCGATTCATCATCTCTACTAGATATTTCTGGAACGGAAACCATGATAATGATTCCAAACGATATGCTTGGGAATGATGGTTTATCATACGGAACTTCCGTTCTTGATACCCTTGACTTGGGTACTCCCCCAGATTTTGATCTTTCAAATCTGAATTTTTACTCTCAAGATAGTATTTTCGACTGGGTCGACAGATTATGA 1191 0.4055 MARSWLIDIGGFAKKVKSTNLSPADQIKDCGAYRDCPNCHYRIDNRDVSTEWPGFPVGVKFDPSDVELLEHLAGKCGIGNAQLHMFINEFIPTIEEEEGICYTHPENLPGVKKDGSSAHFFHRTTNAYTTGQRKRRKIHHQCLTEEHVRWHKTGKTKAILEDGVHKGFKKIMVLYIRPKKGSKPDKTNWVMHQYHLGTDEEEKNGEYVVSKIFQKQTEKNEENPAVEDSDQNEKNENRLADDSNCIASRTSPRTPKPNPPNPPRAGNFVDNDDNIDETELPFTQDVKCVPQCDVLDQNNAGDPAWLAGESQAVENFDFDGLDDILFCNEIFDSSSLLDISGTETMIMIPNDMLGNDGLSYGTSVLDTLDLGTPPDFDLSNLNFYSQDSIFDWVDRL* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2590 396 ProSiteProfiles NAC domain profile. 55 215 IPR003441 GO:0003677|GO:0006355
Ahy16g2590 396 SUPERFAMILY NAC domain 40 215 IPR036093 GO:0003677|GO:0006355
Ahy16g2590 396 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 394 IPR044799 GO:0003700
Ahy16g2590 396 Pfam No apical meristem (NAM) protein 56 196 IPR003441 GO:0003677|GO:0006355
Ahy16g2590 396 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 1 394 - -
Ahy16g2590 396 MobiDBLite consensus disorder prediction 215 276 - -
Ahy16g2590 396 Gene3D NAC domain 65 220 IPR036093 GO:0003677|GO:0006355
Ahy16g2590 396 MobiDBLite consensus disorder prediction 215 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2590 Ahy-Chr16 136652599 136656708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2590 33 213 NAC Transcription Factor Family AT4G28500 56.831 2.09e-67 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy16g2590 NAM 1.20E-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2590 - - gmx:100794879 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2590 16 136652599 136656708 Ahy16g2590 16 136652599 136656708 ECH