Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2570 ATGTGTAACAAGAATAGCCCTCCTCCTTCAGTAGAAACCCAAAAGAAAGAACCAAGTATGAGGAAAACCAGAAAACGAACAAATAAACTGTCTCCTTCTTTAACTTCTTCTTCTTCTACTACCACTGCATCTCTTAAACCACTACGTCGCAGAAACAGAACCAAAACCAGAAAGCCAAAGTACCTCAGTCTCCGCCTCATAAAAAAGAATAACAAAGATGAGAAACAGCCACAGCTGAACCTCTTCCCTCTGCATCCGCAAAACACGGTCGACGATAAAGACATGCAGGAGGAGAACAACTCCGTGGCGTTGCTCTTCAGCTCCGACGGCGGCGCCACCCTCAACGGCCTGCTGGAAGACGACAGTACCGCGACGACTTCGACGGCGATGTCGGAGGAGGGGTCGTTCTCACCGGCGGCGGGTGTGGGCGGCGACGGAGGGTGGCTGGTTCGGAAAGCGATGAGGAGGAGGGAGGAAGAGGGGAGTGAAGAAGAGAGGTGGGTGTGTTACTCAGAAGTGGTGGAGAAGAAGGAGACGATGGAGGAAGTAACGAGTTATTGCGGAACGACGTCGTTTGGGTTGTTGTCATTGAAGCTGGATCATGAGGGGATATTGAATGCTTGGTCTGATAAGGGCTCCCTTTACATTGCAGGGGAGGCCCCACAGACTGTCCCTGATTTCCACAATGATGCTCTCTTCTATAATGCTCTTCTTCCCAATAATATTGGAGGTGATGGGTGTGGGAGTAATGATGGCATTGGGAACACATGGGTTGTACCGGAAATTGGTGGAGAGAACAGGACGAGAACGGAAGAAATGGGGTTGAAGGTGGGGCAGAGAGAGGCAAGCGTGCAGAGATACAAAGAGAAGAGACAGAACAGGCTCTTCTCTAAGAGGATCCGTTATGAAGTCCGCAAGCTCAATGCTGAGAAGCGGCCTCGGATGAAGGGACGATTTGTGAAGAGGGAATGA 972 0.5051 MCNKNSPPPSVETQKKEPSMRKTRKRTNKLSPSLTSSSSTTTASLKPLRRRNRTKTRKPKYLSLRLIKKNNKDEKQPQLNLFPLHPQNTVDDKDMQEENNSVALLFSSDGGATLNGLLEDDSTATTSTAMSEEGSFSPAAGVGGDGGWLVRKAMRRREEEGSEEERWVCYSEVVEKKETMEEVTSYCGTTSFGLLSLKLDHEGILNAWSDKGSLYIAGEAPQTVPDFHNDALFYNALLPNNIGGDGCGSNDGIGNTWVVPEIGGENRTRTEEMGLKVGQREASVQRYKEKRQNRLFSKRIRYEVRKLNAEKRPRMKGRFVKRE* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2570 323 MobiDBLite consensus disorder prediction 29 47 - -
Ahy16g2570 323 ProSiteProfiles CCT domain profile. 280 322 IPR010402 GO:0005515
Ahy16g2570 323 MobiDBLite consensus disorder prediction 1 89 - -
Ahy16g2570 323 MobiDBLite consensus disorder prediction 48 65 - -
Ahy16g2570 323 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 42 323 - -
Ahy16g2570 323 Pfam CCT motif 280 322 IPR010402 GO:0005515
Ahy16g2570 323 PANTHER CCT MOTIF FAMILY PROTEIN 42 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2570 Ahy-Chr16 136271598 136276493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2570 195 322 C2C2-CO-like Transcription Factor Family AT1G73870 43.750 4.01e-23 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy16g2570 CCT 1.50E-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2570 - - adu:107494886 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2570 16 136271598 136276493 Ahy16g2570 16 136271598 136276493 ECH
Ahy16g2570 16 136271598 136276493 Ahy6g2207 6 104285473 104290117 hybridization