Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2531 ATGGGAAGAAGTTGTTCTTCCATATCACTCTTCCTTGCCTTGAAGTTATTACTACTACTAGTAGCATGGTCATCAAAAAGGGGACACTGCTTAACTACCCCACGACCAAGGACCACTAATAAGAGCATAGGTGCAGTGCTTGATCTGGATTCACTAATGGGTAAGCAGCAGAAGATAGCCATGAAAATTGCCATCAGAGATTTCAACAGATTCAGTAGAACTAAACTCCAGTTGGAGGTGGGAAATTCCCGCGGGAATTCGGCTCAAACAGTTGTTAACGCCATGGATCTTGCACAGAAGAAGCAGTTGCTAGCCATCATAGGAACAATAACACACAGCGAAGCATATTTGGCAACTGAAATTAATAACGCCACAAAAAACACCCCTATATTATCTCTATCTTCGTTTGCACCCATCACAGAGTTACCCTCTTCTCCATTGCCACAACTAATCCAACTCGGAGATGATATCAACATTCAGATGCAATGCCTTGCAGCCATTGTAGGACACTTCAAGTGGAAAAAAGTGACAACAATATATGAAGTTAATAGTGGGTTTTCTTATGATCCAGGGGTACTAATTTCCCTCTCCAATTCTCTTCGCCATGTTGGATCTGAGATCGTTAACCAGTTAGCATTGCCTTCCTTGTCTTTGCAATCTAGAATCGAAAATGAGCTTAACCAACTCAAGAAGAAGAGTAACAGGGTCTTCTTGATTGTGCACTCTTCTTTAGAGTTGGCTAGCGTGCTTTGCAAGAAAGCAAAACAAATGGGTTTGATGGAGAAAGGATATGTATGGATCATCCCGAACGAGGTTGCTGCCCTTCTTGATTCGGTTAACTCTTCAGTTATCTCTACCATGCAAGGTGTTATTGGATTCAAAACACATTTTTTGGAAAGTACCAAACCATATACAAAGTTCGGGTTCAGATTTCGAACAAGGTTTGCACTAGAGTACCCTGAAGAAGAAGAGAACAATACTCCAAGTGTTTTCGCACTTCGAGCTTATGATGCAGCTTTTGCTATTGCTAATGCTAAGGTTACAAACAAGTCACAAGGAAAGTTCAACATGAAAGAATTCCTTGATGAAAATTTACATCAATCTTCAACCTTCACCATAATTAATGTGATAGGAAAAAGCTATAGAGAAATGGCATTTTGGTCTCCAACACATGGTTTTTCCAAGAACTTTGTTGAACATGAGAAAATGGAGGTAAATAAATTTAACGGTTATGATGGAGTTGTTTTGAGTAATATTTATTGGCCTGGAGATTTACACTCAGTTCCAAGGGGATGGACAAATAGTAATGAGGAAATGCCACTTAAAATAGGAGTACCTGCAAATGATGCTTTTGCTCAGTTTGTGAATGTCACCTATGGTGACAGCAAGCATGCAACTTCCATAACTGGTTTTTCAATCAATGTCTTCAAAGCAGCTATTAAGAATCTTCCATATCACTTGCACTATGATTTTGTTCCCTTCAATGGCTCCTATGATGAAATGGTTAATCAAGTTAACAATAAGACATTAGATGCTGCAGTTGGAGATATATCAATATTGGCATATAGATATCATTTAGTTGAGTTCTCACAACCATATGTTGACTCTGGACTTAACATGGTGGTCGTTGAGAAGCCAAATAAATCAAAACAAACATGGATGTTTATGGATGCATTCACAAAAGAGATGTGGTTGATGATGGCAGCAGTGCACGTTTTGGTTGGATTTGTCATTTGGTTGATTGAACGCGAAGAAAATGAAGAACTACAAGGTCTGGGGGCGATGCTTTGGTTTTTAGTCACCGTAATATTCCTTGCACATAGAGAACCAATAAGAAGACCATTGGCTCGAACCGTGTTGGCACCATGGTTATTTGTTATCCTAATTGTAACCAGTAGCTTCACAGCGAGTCTAACATCGATGATGACTGTATCGCAACTCGAACCATCAGTGGTTGATATTCAGACCCTTCAGAAGAGAAATGCTCCAGTTGGTTGTGATGAGAATTCATTTATTGTGAGGTATTTGATTGACATACTAAAATTCAAACCTGAGAACATTAGAAGAATAAATTCCATTAATGGTTACCCTGCAGCATTTAAGAATAATGAGATTGAAGCAGCTTTCTTTGTCGCCCCTCATGCCAAAGTCTTTCTCGCAAAGTACTCATGTGAAGGCTTCGTCCAAGCAGGGAGCACCTTTAGGCTTGGTGGCTTTGGTTTTGTGGGTTCCTAA 2235 0.3964 MGRSCSSISLFLALKLLLLLVAWSSKRGHCLTTPRPRTTNKSIGAVLDLDSLMGKQQKIAMKIAIRDFNRFSRTKLQLEVGNSRGNSAQTVVNAMDLAQKKQLLAIIGTITHSEAYLATEINNATKNTPILSLSSFAPITELPSSPLPQLIQLGDDINIQMQCLAAIVGHFKWKKVTTIYEVNSGFSYDPGVLISLSNSLRHVGSEIVNQLALPSLSLQSRIENELNQLKKKSNRVFLIVHSSLELASVLCKKAKQMGLMEKGYVWIIPNEVAALLDSVNSSVISTMQGVIGFKTHFLESTKPYTKFGFRFRTRFALEYPEEEENNTPSVFALRAYDAAFAIANAKVTNKSQGKFNMKEFLDENLHQSSTFTIINVIGKSYREMAFWSPTHGFSKNFVEHEKMEVNKFNGYDGVVLSNIYWPGDLHSVPRGWTNSNEEMPLKIGVPANDAFAQFVNVTYGDSKHATSITGFSINVFKAAIKNLPYHLHYDFVPFNGSYDEMVNQVNNKTLDAAVGDISILAYRYHLVEFSQPYVDSGLNMVVVEKPNKSKQTWMFMDAFTKEMWLMMAAVHVLVGFVIWLIEREENEELQGLGAMLWFLVTVIFLAHREPIRRPLARTVLAPWLFVILIVTSSFTASLTSMMTVSQLEPSVVDIQTLQKRNAPVGCDENSFIVRYLIDILKFKPENIRRINSINGYPAAFKNNEIEAAFFVAPHAKVFLAKYSCEGFVQAGSTFRLGGFGFVGS* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2531 744 Pfam Receptor family ligand binding region 58 345 IPR001828 -
Ahy16g2531 744 Pfam Ligand-gated ion channel 561 668 IPR001320 GO:0015276|GO:0016020
Ahy16g2531 744 Gene3D - 553 678 - -
Ahy16g2531 744 Gene3D - 156 327 - -
Ahy16g2531 744 CDD PBP1_GABAb_receptor_plant 42 397 IPR044440 -
Ahy16g2531 744 Pfam Bacterial extracellular solute-binding proteins, family 3 465 729 IPR001638 -
Ahy16g2531 744 PANTHER GLUTAMATE RECEPTOR 39 741 - -
Ahy16g2531 744 SUPERFAMILY Periplasmic binding protein-like I 43 432 IPR028082 -
Ahy16g2531 744 Gene3D - 335 443 - -
Ahy16g2531 744 Gene3D - 460 535 - -
Ahy16g2531 744 Gene3D - 536 545 - -
Ahy16g2531 744 SUPERFAMILY Periplasmic binding protein-like II 417 742 - -
Ahy16g2531 744 Gene3D - 38 152 - -
Ahy16g2531 744 SMART GluR_14 442 744 IPR001320 GO:0015276|GO:0016020
Ahy16g2531 744 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 39 741 - -
Ahy16g2531 744 CDD GluR_Plant 440 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2531 Ahy-Chr16 135089943 135099224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2531 89 741 Ion Channels AT5G11210 32.168 2.46e-104 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2531 - - aip:107605043 1443.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2531 16 135089943 135099224 Ahy6g2169 6 103375257 103379783 hybridization