Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2500 ATGGATAGTGGCAGCGAAGGGAACTCGGACTTTTCGGGTCAATGGACCGATGGATGGAGTAGTGAGTCCGAAGAGGAAGAGGAAGAGGTGTCTAAGGGGTTAGAGTCACCGTCACGAGTGTGCAAGGATAGTGAGACGGTAGAGAGAGTTGATGTATTTGGTGAAGGGGACGATGGTGGCAGAATGCCTTCATCGGAGTCACCACGTGGTTCAGGCAATGAAATGAGTGATGATGTGGACACTTCGATGTTTTCAACCGCGGCTGCATTGGCCGATGCCGAATTTCATAGGGTTGAAGATGCTTATGCAAGATATGTGGAGTATGCAAAGGCGACTGGATTTGCTGTTCAAAAAGGGGATTCCATTAAAGATGATGAAGGAAATGTTGTGAGAAAATTTTCCTATTGCAATCGACAGGGCTTGCGGGAGAAGAAGCACTATGAGAGGGCGGATAGGAAGAGGGCGCATAAGGCAGATACTAGGACCAACTGTAGTGCGAAGTTCGTTGTATTTTTAGACAAACAGAGTGGCAAGTGGAGGACGAAGACATTTGTTCAAGATCACAATCATGATTTGACTTTGCCTGCTTTCACTAATGTGATGGCAGCCCACCGCAATATCAACGAAGGTGATAAAGCCCACATTCATAGTATGCACGAAGCAGGATTCCAAACCAATCAGATCATGTGGTTCTTTGCATATTTGTCTGGGGGTTATCAAAACTTGCACTTCATAAAGAAGGATGTTTACAACTATATCGACGATGTACGTCGCTCTCGGATTGTTCAGGGCAATGCGGCAGCAGCAATAAGTTATCTGAAGGGAAAAACTGAGATGGATCCATTAGCTGTTGTGATGTACACATATTGTCCCGAAAACCACCTTGGTCATCTGTTTTGGTCAGACGGAGCGATGCAGTATGACTATGAGTGCTTTGGTGACGTGTTGCCCAAAGTTGTGGTTACAGATGGAGACGAGTCAACGAAGGAGGCTATTAGGACAGAATTCCCTAATGCCACGCATCGACTTTGCACCTGGCACTTAGCGTGGAATGCTGTTTCAAACATCAAGGATAATGATTTTTGTGCTGCTTTTAAGACTGCTGTGTATGGTCATTTTGAGGTAGAGGAGTTTGATCAGTATTGGGCAGACATGGTTGATGCATTCGGGTTACAGGAGAACGAATGGATTTGGGCAACGTACGAGAAGAGGGTACATTGGGCAAATGCATATTTGTGTGATACGTTTTGTGCTGGGTTGAGAACGACGTCAAGACGCGAGGGTATTAATGCATTGCTTAAAAGGTTTATCAAGTCATCGAATTGTTTGTTGGAGTTGGTCGAGAATCTTAAACGTGTGGTTAAGGACTACAGGAATAATGAGTTTATCGCGGATTACAAATCTCTATATTCAGAACCGGTCATAACTACTGGACTGGAATCAATTGAGAGGGCCATGTCACAAATCTACACTAGAGAGATATTCTTCGAGGTCAAGAAATAG 1503 0.4464 MDSGSEGNSDFSGQWTDGWSSESEEEEEEVSKGLESPSRVCKDSETVERVDVFGEGDDGGRMPSSESPRGSGNEMSDDVDTSMFSTAAALADAEFHRVEDAYARYVEYAKATGFAVQKGDSIKDDEGNVVRKFSYCNRQGLREKKHYERADRKRAHKADTRTNCSAKFVVFLDKQSGKWRTKTFVQDHNHDLTLPAFTNVMAAHRNINEGDKAHIHSMHEAGFQTNQIMWFFAYLSGGYQNLHFIKKDVYNYIDDVRRSRIVQGNAAAAISYLKGKTEMDPLAVVMYTYCPENHLGHLFWSDGAMQYDYECFGDVLPKVVVTDGDESTKEAIRTEFPNATHRLCTWHLAWNAVSNIKDNDFCAAFKTAVYGHFEVEEFDQYWADMVDAFGLQENEWIWATYEKRVHWANAYLCDTFCAGLRTTSRREGINALLKRFIKSSNCLLELVENLKRVVKDYRNNEFIADYKSLYSEPVITTGLESIERAMSQIYTREIFFEVKK* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2500 500 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 317 499 IPR031052 GO:0006355
Ahy16g2500 500 MobiDBLite consensus disorder prediction 1 19 - -
Ahy16g2500 500 Pfam FAR1 DNA-binding domain 105 193 IPR004330 -
Ahy16g2500 500 MobiDBLite consensus disorder prediction 1 79 - -
Ahy16g2500 500 Coils Coil 440 460 - -
Ahy16g2500 500 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 89 315 IPR031052 GO:0006355
Ahy16g2500 500 MobiDBLite consensus disorder prediction 32 56 - -
Ahy16g2500 500 Pfam MULE transposase domain 315 349 IPR018289 -
Ahy16g2500 500 PANTHER OS02G0262500 PROTEIN 317 499 - -
Ahy16g2500 500 PANTHER OS02G0262500 PROTEIN 89 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2500 Ahy-Chr16 134373637 134375312 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy16g2500 FAR1 2.00E-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2500 - - ahf:112757616 1023.46