Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2494 ATGCCTCCAAAGAAGAAGAAGAACAACACTTCTTCTTCTTCTTCTGCGTCCAAGAAGCATAACCCTCAACCTTCCAAGTTCGGCATCCAGCACTTCTTCGATCGCCACACACAGAACAACGCTCTCCTCGCCTCCCAAAAGCTCCAAACTAACAATGCTTCCGATTCCGCCGCTAAACCAGTTTCTGATCCTCTCCCTGCCCGAACCAGAGACCCGATTTTCAGCACCGTTGTGCAGGTGACTCCCCAACCGTCGCCGCAAAAACCTAGCGACGACAAGGGTAATACCAATTATATTAGTAATAATGATAATAGAAGTAACAATGGACCGTCCCAGAATACTCCTACTGAGAATTCGGTGGTGCCGGTTGATAATGTGATGGAAGATATTGTGTCTGAGGTGTCCCCAGATATTTCTAAAGCTATGCCGCTTAAGCGCTTCAAATTCTCACCTGGAATGTTTATAAAGCAGACTCAAGATTATGGGGTTGATGAGGTCACATGGAAGATATCTCCAGTGAACGAAAGACTCCAAGCTGTTTCTAAACATGTGCCGAATGTTATTAAAGCGTTGGCCGACTCTTCAAGACTCAACTTATTGCCATTTCGTAGCTGCTCAGAAGATAAGACTTTTCGGGATAAAGATGACAAGGTTGACGAATTGCTTACTTCACCAACTCCCAAGGCTTCTGCAAAAGCTCTACCTTCAATGAGTAAATTAGGCTTGAAAAGGATAAACCCAGAACAAAGTGTGGATTTTGACACCAATCCAACTACTCTGAGCTACACTGGAGTATCTAGCAGACAGAGTCCCTTCAGGACTCCACCCTCTTTGTCTCATTGTCCCGATAAGGTGCATCCTATTAATGACATTCAATGCACTGGACCATCTGATCAACTTTATCTCAGACAGCACAAAAAGACTTTGCTTGAACTGTTAGATCAAGTTGAAGATGCCATTGCTGTTGATGACGCTACTGTTTGTAACAAGGGAACTGATTCTTTAAAATGTTGTGACGGCATTGCTGATGAGCTCCCTGTTAGAGCCAACCATGCTGAAGAAAGAACAAGATCACATAGTTCTAAAGAGGATATGGTTGCTGTCTCTAGTTCTAGCTATCTGGTTTTGCAGGTGTCTGAAAATTCTAGGTCTGCTGATTCATCTGCTGCTGATGCTCGATCCCCATACAAGGTGCTTCGCTTACTAAATGAGCAAACTGGAGAGGAGCGGGCTGTAAACTTGAGGGATGAGTGGTTTTTCAGTGTAATTGCACCTGGAGATACTGTAAACATAATCGGTCAATTTGATGAAGGAGGAAGTTGTGATATAGGCCATGAAAATAATTTCTTGATTGTGCACCCAGACATTCTGCTGTCTGGAACAAGGGTTGCTGGCAGTTTTGGTTGCCTTAGGAGAACTGTCTTAGATGAGAGGCTAAAATGCAACGAGTACTCTACTGCAGCATTGACTGGAACCTTGCTTCACCAAATTTTTCAGGCTGGGCTCACAGAAGACAATCCATCCATTGACTTCTTGGAAGGTTACACAGAAGTGGTATTACTTAGGAACATTGAGAGTCTGTATGCTTGTGGAGTAAATGAAAGTGATGTTCGGAAAACCTTGATTGATGCTGTCCCGAGAATATTGAGTTGGATTTTACGGTTCACAAATAAGGAGGAAAATGAAGATCCTAATGTTTGTTTTGGATTTCACAATAGGCCTAACAAAGTTGCCATATCTGAGGTAATTGATATTGAAGAGATGGCATGGGCTCCTAAATATGGTTTGAAAGGGATGATTGATGCTTCAGTCAGAGTCACAGTACAATCAGTAAAAGATGAACTTGAGGAGAAGATTATGCCAGTAGAGTTCAAAACCGGGAAATCACCAGCTGGCCAGTCATCAGCAGAACACAATGCTCAAGTAATCTTATACACTCTTCTGATGTCTGAAAGGTATCAAAACACCATTGATTCTGGTCTTCTATATTATCTTCAATCAGATCAGACACAGGGTATTGTGGCTCAAAGATCTGACTTAGTTGGCCTAATAATGCGACGGAACGAGCTAGCAAGTGATATTCTTAAGGCATTAACCTCGCAACAACTTCCACCAATGTTAAAGAGTCCTGGCATTTGCAAAGGTTGTCGCCATCTTAATGTTTGTAGCATTTATCACAAGTTACATGGTGGAAGCACAAAAAGCAGTGGATTGGAAGATGTATTTGATTCTCTTACTGACCACCTTACATCTTCCCATTCCAAGTTCCTCTGCCATTGGGATCGGCTGATTGACTTGGAAGCTAAGGAGACTGAGCTTTTAAGGAAAGAGATGTGGCGATCACATAGTTTAAAAGCTCCAAACTGTGGTAGCCTTTCTTCTATTGTTCTCGATGCTTCATATGGAATTCCTCATCAGAAATCTGTCAAAGATAATCGCTTTGTTTATCGTTTTGTAAGACAAGATAATTGTCCCTCTGGAGTTTCTGACGGTGATCATTGTAGTACCTATTCAACAAATTTAGATCTTACACTTGGAAGTGGAGACTATGTGATATTGAGTAATGACTCTAGTGGGCAAACTATTGCAAAAGGGGTGATCTCTGATATTAGCCAGATTCATGTATCTGTTTCCTTTTCAAAACGCTTACGAATTCCTGGAAGATGTTCCACTACACATGATCTCCTTCAACAGGTTTGGAGAATTGACAAGGATGAATTTGTGACTTCGTTTGCATCTATGAGGTTTAATCTTGCACAACTTTTTCTACAAAATGATCGGAGTACTCATCTGCGGAGGATGATTGTTGATCTTGAGGCTCCTAGGTTTGACTGTGAATCTATAGTCAGTCAGGATCCAGCAATATCATATGTTCGGTCGAAGAAATCTTTGAATGATGATCAATGTAAAGCAATTCTCAAGATACTTGCAGCAAAAGATTATGCGCTTATATTAGGAATGCCTGGAACAGGAAAGACTTCTACTTTGGTTCATGCTGTGAAAGCCTTGCTGGAAAGGGATTCTTCCATTTTGCTGACAGCCTATACAAACTCCGCAGTTGATAATTTACTCATGAAATTAAAAGCACAGGACATTGATTTTGTTCGGATTGGAAGACCAGAAGCAGTGCATGAGGTGGTCAGAGGACACTGCCTTTCAGCAACAAGTATACAAAATGTTGAAGATATCAAAATAAGGTTAGGTCAAGTCAGAGTTGTTGCAGTTACTTGTCTTGGCATTTCCAGTCCCTTGCTTGCCAACATGAGATTCGATGTATGCATTATGGATGAAGCTGGACAGACAACCCTACCTGTGTCCTTGGGCCCCCTAGCATTTGCCTCAGTGTTTGTACTTGTTGGGGATCATTATCAATTGCCTCCACTTGTCCAGAGCATAGAGGCCCGAGAGAATGGCATGGGGATAAGTTTGTTCTGTAGGCTCTCCGAAACACATCCAGAGGCAATTGCGGAATTACGGAGCCAGTACCGGATGCGTCAAGGCATTATGGACTTGTCAAATGCCTTGATATATGGTGACAGGTTGAGGTGTGGTTCATCTGAAATAGCTAATGTAACACTTGAGTTTTCTAATTTAAACTGTGGCTTGCCTTGGCTAGAAGATGTTTTAAATCCAAGCAGGCCAGTGATTTTTATTGATACTGACATGTTACCCGCTTTGGAGGTAAGAGATCAGAAGACTGTCAATAATCCAGTTGAAGCTCACATAATTGCCGAGGTTGCAACGGAATTGGTTAGAAATGGAATTGTAGGAGAGCAGATTGGTGTTATTACCCCCTATAATTCACAGGCAAACCTCATCCGGAAAGCAGCTTCCGAGACTTCCATGGAGATACATACCATTGACAAATATCAGGGTAGAGATAAGGATTGCATATTAGTCTCTTTCGTAAGATCTAGTGAAAACCCAACGAACCTTGCTGCTTCTCTTCTCGGAGACTGGCACAGGATAAATGTGGCTCTCACTCGCGCTAGGAAAAAGTTGATCATGGTGGGGTCTCGTAGAACTCTTTCAAAGGTTCTGCTACTGAAACTTCTCATTAAGAACGTTGAGGAACAATGTGGAATTATAAGTGTTTCGAAGAAGGATATCGTTCCAAAAGGTCAGCTCCGAAAATGTTCTCAAATGGGTTGA 4152 0.4208 MPPKKKKNNTSSSSSASKKHNPQPSKFGIQHFFDRHTQNNALLASQKLQTNNASDSAAKPVSDPLPARTRDPIFSTVVQVTPQPSPQKPSDDKGNTNYISNNDNRSNNGPSQNTPTENSVVPVDNVMEDIVSEVSPDISKAMPLKRFKFSPGMFIKQTQDYGVDEVTWKISPVNERLQAVSKHVPNVIKALADSSRLNLLPFRSCSEDKTFRDKDDKVDELLTSPTPKASAKALPSMSKLGLKRINPEQSVDFDTNPTTLSYTGVSSRQSPFRTPPSLSHCPDKVHPINDIQCTGPSDQLYLRQHKKTLLELLDQVEDAIAVDDATVCNKGTDSLKCCDGIADELPVRANHAEERTRSHSSKEDMVAVSSSSYLVLQVSENSRSADSSAADARSPYKVLRLLNEQTGEERAVNLRDEWFFSVIAPGDTVNIIGQFDEGGSCDIGHENNFLIVHPDILLSGTRVAGSFGCLRRTVLDERLKCNEYSTAALTGTLLHQIFQAGLTEDNPSIDFLEGYTEVVLLRNIESLYACGVNESDVRKTLIDAVPRILSWILRFTNKEENEDPNVCFGFHNRPNKVAISEVIDIEEMAWAPKYGLKGMIDASVRVTVQSVKDELEEKIMPVEFKTGKSPAGQSSAEHNAQVILYTLLMSERYQNTIDSGLLYYLQSDQTQGIVAQRSDLVGLIMRRNELASDILKALTSQQLPPMLKSPGICKGCRHLNVCSIYHKLHGGSTKSSGLEDVFDSLTDHLTSSHSKFLCHWDRLIDLEAKETELLRKEMWRSHSLKAPNCGSLSSIVLDASYGIPHQKSVKDNRFVYRFVRQDNCPSGVSDGDHCSTYSTNLDLTLGSGDYVILSNDSSGQTIAKGVISDISQIHVSVSFSKRLRIPGRCSTTHDLLQQVWRIDKDEFVTSFASMRFNLAQLFLQNDRSTHLRRMIVDLEAPRFDCESIVSQDPAISYVRSKKSLNDDQCKAILKILAAKDYALILGMPGTGKTSTLVHAVKALLERDSSILLTAYTNSAVDNLLMKLKAQDIDFVRIGRPEAVHEVVRGHCLSATSIQNVEDIKIRLGQVRVVAVTCLGISSPLLANMRFDVCIMDEAGQTTLPVSLGPLAFASVFVLVGDHYQLPPLVQSIEARENGMGISLFCRLSETHPEAIAELRSQYRMRQGIMDLSNALIYGDRLRCGSSEIANVTLEFSNLNCGLPWLEDVLNPSRPVIFIDTDMLPALEVRDQKTVNNPVEAHIIAEVATELVRNGIVGEQIGVITPYNSQANLIRKAASETSMEIHTIDKYQGRDKDCILVSFVRSSENPTNLAASLLGDWHRINVALTRARKKLIMVGSRRTLSKVLLLKLLIKNVEEQCGIISVSKKDIVPKGQLRKCSQMG* 1384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2494 1383 MobiDBLite consensus disorder prediction 32 58 - -
Ahy16g2494 1383 MobiDBLite consensus disorder prediction 74 119 - -
Ahy16g2494 1383 Pfam Domain of unknown function DUF83 609 723 IPR022765 -
Ahy16g2494 1383 Pfam AAA domain 964 1054 IPR041677 GO:0004386
Ahy16g2494 1383 Pfam AAA domain 1067 1131 IPR041677 GO:0004386
Ahy16g2494 1383 Pfam DNA replication factor Dna2 404 606 IPR014808 -
Ahy16g2494 1383 MobiDBLite consensus disorder prediction 1 119 - -
Ahy16g2494 1383 MobiDBLite consensus disorder prediction 1 24 - -
Ahy16g2494 1383 Gene3D - 892 1062 IPR027417 -
Ahy16g2494 1383 Gene3D - 1063 1161 IPR027417 -
Ahy16g2494 1383 Pfam AAA domain 1141 1340 IPR041679 -
Ahy16g2494 1383 PANTHER DNA REPLICATION ATP-DEPENDENT HELICASE/NUCLEASE DNA2 228 1358 IPR026851 GO:0017108|GO:0017116|GO:0033567
Ahy16g2494 1383 Gene3D - 459 723 IPR011604 -
Ahy16g2494 1383 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 962 1347 IPR027417 -
Ahy16g2494 1383 PANTHER DNA2/NAM7 HELICASE FAMILY 228 1358 IPR045055 -
Ahy16g2494 1383 CDD SF1_C_Upf1 1164 1342 IPR041679 -
Ahy16g2494 1383 Gene3D - 1162 1369 IPR027417 -
Ahy16g2494 1383 CDD DEXXQc_DNA2 963 1163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2494 Ahy-Chr16 134224777 134246087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2494 1 1105 Core DNA Replication Machinery Family AT1G08840 52.711 0.0 1066
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2494 K10742 - gmx:100799415 1729.15