Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2466 ATGGAAACCGTTGACGCCTTCCTGACCTCCGGTGACCGCAATAAACCCAATACGTTTGAAATATGGGTTCAAAGTAGAGTGTTGCAGCGCCCAATTTTCTGGTGGATAGTTTCTATTGTTGGAGCTGTTGTCGGATTAATAGGTTTTGGTCTAAGCTCCAACTTAAAGCATCTATTGGGAGACCCAAAACCATGGAAAAACGTTGGGTACACTCTTTTCTGTGTCTCCGTTGTTGTTTTTGCAGTTGTCCTTCATCGGTTGAAAGGTCCAGCCAAGGTGTTACCTTATCGTCGCCAATTCAAAGCGTGTGGTGTATTCCTGGCCCTGTTGGTGATCTTTATCTACACCTTTTCCAGAAGAGGGGAAGAACAAGAACAACAACGGAAAGGACACAATGATACACCAAATAACGTACAAGTTGCTGGTATAGTATCCCTTGTTGGTTTTGTTGTGATGGCTTTTGCTCTATCAATACAAACTAACTATGGATTTGTTGGAGAACTTATGAAATTCTTTTTAGAAGAACTTATGGTGGAGCTCATAAAGATAAGATGGTGGTACGGCTTCTTTGGAGCTCTCTTCAGTTTTCTCCTCATCATTCTCCATTCATGTAAAGAGAAACATGCCGAAGGAGATGTGCATCAAGATCCAATTGACAACAACACTACTCTCCTCCTAGATATTAGAACGGATTCTTTGTCTACTGTACGTCCAACTCAAGATCTCTTCACCCTTGCGCTACTAAATCTTAACAAGAAGGATTTGGAACTTTCCCAAAATTTACGGCGTCATTTGATTGGCTACATCAATGATTGGAGTGACCAGATTCCGGAGGGAATAATGCAAGACCAAAACTTCATTAAGGACAGGATTCGGCGCGAAGTTGAGACTCTTCACTTAATAGTGAATCAGATGACATCAAGGGACCATTTTGAAATGGACAATTGGTTGGTGATGGTGTACATTAGAAGTCGAAAACAATTCCTGCTGACATGCGAATCCGAGCTGAAATCGGACAACTCGACGGCCCAGGTGAGTAGGATCAAGAAGTGGATTAAATATTGCAACATAGTATTAAAGATACTAATTCCCAACGAACGGGTACTCTGTCAACAAGTCTTTGGCGAATTCTCTCCCATCTCCAACAAGTGTTTTGAGCAGTTTTGCTCACAAGTCAAACAAGATTTGCTCAGTTTCATTCAAGGTATCCCTGAACTGATGAGTTCTCCTGAAATTGCCCTGCTGTTCAGAATAGTACGTGACTTAATTGTTCCAGAGTTCCATTCACTGTTTCCTCATAATCTATCCATGACCATCGAAATGATTGATCTCACAAAAAAACTAGGAGAAGCAACGAGAGATTACTATTTCAGGGATGACGACTTTCCTCCCGAAATTGAAAACTCTCATTCCTGTGAGCCTCATCCAATTACCATCCAAGTATTGAACCGCCTCGATATTGCTTTCAAAGACAGGGACATCATTGAACCACTCCTCAAAACATACCCCAATTCCAAAGTTCAAGTTCGGGAGGAATGGTCTTTGATTTCACACTATATAGATTGGAATATCAACAAACTTGAGGCCTCCTTAGAGTCCACGTTGAAGAAGACCTACATTTATGAATTGCAAGGAGTGTCTATCATGGCTAATGTTAACTACATATTAAAGAAGGCTTACGAATTTGGATTTGAATTAACTAAGAAAGATGGTTGGCTCAAAGAACAAGCGTCCAAAATTCAACAGTGCTTTGAACAATATTATCGGGAGAATCCGACTGAATTGTTGGCCTTTTTCAAACAGCATAATGAGAAAGTCACGGAACATTCAATGAGGGAGATGCTAAGGTTGTTCAATTTTAACCATTTACTTGAGAAACAATCCTATAGTTATCAAGGAGAGCTAATACTTTTAGTGAACAAGGGATTTGTCCCAAGTTGTGAAAATTTCCTTCACAGATTTCGTACTTTACTAAATGGCAATGAGGACACACACCACACATATATACCAACTATTGAAGATGAAATTGAAGATGATGTTGCTTGGAGATAG 2052 0.402 METVDAFLTSGDRNKPNTFEIWVQSRVLQRPIFWWIVSIVGAVVGLIGFGLSSNLKHLLGDPKPWKNVGYTLFCVSVVVFAVVLHRLKGPAKVLPYRRQFKACGVFLALLVIFIYTFSRRGEEQEQQRKGHNDTPNNVQVAGIVSLVGFVVMAFALSIQTNYGFVGELMKFFLEELMVELIKIRWWYGFFGALFSFLLIILHSCKEKHAEGDVHQDPIDNNTTLLLDIRTDSLSTVRPTQDLFTLALLNLNKKDLELSQNLRRHLIGYINDWSDQIPEGIMQDQNFIKDRIRREVETLHLIVNQMTSRDHFEMDNWLVMVYIRSRKQFLLTCESELKSDNSTAQVSRIKKWIKYCNIVLKILIPNERVLCQQVFGEFSPISNKCFEQFCSQVKQDLLSFIQGIPELMSSPEIALLFRIVRDLIVPEFHSLFPHNLSMTIEMIDLTKKLGEATRDYYFRDDDFPPEIENSHSCEPHPITIQVLNRLDIAFKDRDIIEPLLKTYPNSKVQVREEWSLISHYIDWNINKLEASLESTLKKTYIYELQGVSIMANVNYILKKAYEFGFELTKKDGWLKEQASKIQQCFEQYYRENPTELLAFFKQHNEKVTEHSMREMLRLFNFNHLLEKQSYSYQGELILLVNKGFVPSCENFLHRFRTLLNGNEDTHHTYIPTIEDEIEDDVAWR* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2466 683 SUPERFAMILY Cullin repeat-like 294 655 IPR016159 -
Ahy16g2466 683 Pfam Exo70 exocyst complex subunit 349 625 IPR046364 GO:0000145|GO:0005546|GO:0006887
Ahy16g2466 683 Gene3D Exocyst complex component Exo70 230 680 - -
Ahy16g2466 683 PANTHER PROTEIN, PUTATIVE-RELATED 34 622 - -
Ahy16g2466 683 PANTHER EXOCYST COMPLEX PROTEIN EXO70 34 622 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2466 Ahy-Chr16 133611236 133614357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2466 348 678 EXO70 exocyst subunit family AT5G58430 28.177 1.24e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2466 - K07195 ahf:112697185 1265.37